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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
266.5
nTPM
Monaco:
238.9
nTPM
Schmiedel:
640.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
266.5
HPA sample
nTPM
gdT-cell nTPM: 60.0
Samples: 6
Max nTPM: 77.6
Min nTPM: 31.7
P10809_1007
56.9
P10809_1022
67.0
P10809_1041
67.8
P10809_1060
59.1
P10809_1077
77.6
P10809_1098
31.7
MAIT T-cell nTPM: 100.9
Samples: 6
Max nTPM: 130.1
Min nTPM: 44.0
P10809_1006
95.3
P10809_1024
112.8
P10809_1043
107.5
P10809_1062
115.8
P10809_1083
130.1
P10809_1097
44.0
Memory CD4 T-cell nTPM: 214.9
Samples: 6
Max nTPM: 273.1
Min nTPM: 162.4
P10809_1014
215.3
P10809_1026
273.1
P10809_1045
253.9
P10809_1064
162.4
P10809_1086
182.4
P10809_1113
202.2
Memory CD8 T-cell nTPM: 112.8
Samples: 5
Max nTPM: 167.9
Min nTPM: 78.8
P10809_1012
167.9
P10809_1027
111.4
P10809_1046
117.1
P10809_1065
78.8
P10809_1111
88.6
Naive CD4 T-cell nTPM: 108.1
Samples: 6
Max nTPM: 164.6
Min nTPM: 76.4
P10809_1015
101.0
P10809_1030
164.6
P10809_1049
76.4
P10809_1068
112.1
P10809_1085
104.8
P10809_1112
89.6
Naive CD8 T-cell nTPM: 93.7
Samples: 6
Max nTPM: 126.4
Min nTPM: 68.5
P10809_1016
119.0
P10809_1031
126.4
P10809_1050
87.5
P10809_1069
86.7
P10809_1087
68.5
P10809_1110
74.0
T-reg nTPM: 266.6
Samples: 6
Max nTPM: 303.5
Min nTPM: 228.4
P10809_1018
236.7
P10809_1037
303.5
P10809_1056
288.8
P10809_1075
282.9
P10809_1094
259.0
P10809_1106
228.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
238.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 167.0
Samples: 4
Max nTPM: 281.8
Min nTPM: 108.1
RHH5202_R3573
156.2
RHH5230_R3602
121.9
RHH5259_R3631
108.1
RHH5288_R3660
281.8
Effector memory CD8 T-cell nTPM: 64.0
Samples: 4
Max nTPM: 91.3
Min nTPM: 36.5
RHH5203_R3574
36.5
RHH5231_R3603
91.3
RHH5260_R3632
61.4
RHH5289_R3661
66.8
MAIT T-cell nTPM: 98.1
Samples: 4
Max nTPM: 126.9
Min nTPM: 64.1
RHH5233_R3605
122.0
RHH5205_R3576
64.1
RHH5262_R3634
79.4
RHH5297_R3663
126.9
Memory CD4 T-cell TFH nTPM: 223.6
Samples: 4
Max nTPM: 295.8
Min nTPM: 159.1
RHH5300_R3666
257.4
RHH5236_R3608
295.8
RHH5265_R3637
159.1
RHH5208_R3579
182.1
Memory CD4 T-cell Th1 nTPM: 163.0
Samples: 4
Max nTPM: 293.1
Min nTPM: 102.7
RHH5210_R3581
102.7
RHH5302_R3668
293.1
RHH5238_R3610
133.3
RHH5267_R3639
123.0
Memory CD4 T-cell Th1/Th17 nTPM: 201.0
Samples: 4
Max nTPM: 312.5
Min nTPM: 127.3
RHH5303_R3669
312.5
RHH5211_R3582
209.2
RHH5239_R3611
127.3
RHH5268_R3640
154.8
Memory CD4 T-cell Th17 nTPM: 226.6
Samples: 4
Max nTPM: 321.9
Min nTPM: 190.4
RHH5304_R3670
190.4
RHH5212_R3583
321.9
RHH5240_R3612
201.2
RHH5269_R3641
193.0
Memory CD4 T-cell Th2 nTPM: 238.9
Samples: 4
Max nTPM: 325.1
Min nTPM: 181.7
RHH5305_R3671
262.3
RHH5213_R3584
186.4
RHH5241_R3613
325.1
RHH5270_R3642
181.7
Naive CD4 T-cell nTPM: 92.6
Samples: 4
Max nTPM: 102.7
Min nTPM: 82.7
RHH5306_R3672
102.7
RHH5214_R3585
87.3
RHH5242_R3614
97.7
RHH5271_R3643
82.7
Naive CD8 T-cell nTPM: 95.2
Samples: 4
Max nTPM: 150.5
Min nTPM: 59.1
RHH5201_R3572
96.1
RHH5229_R3601
59.1
RHH5258_R3630
150.5
RHH5287_R3659
74.9
Non-Vd2 gdTCR nTPM: 78.2
Samples: 4
Max nTPM: 115.5
Min nTPM: 54.9
RHH5235_R3607
54.9
RHH5264_R3636
77.1
RHH5207_R3578
65.2
RHH5299_R3665
115.5
T-reg nTPM: 196.4
Samples: 4
Max nTPM: 304.5
Min nTPM: 118.5
RHH5301_R3667
304.5
RHH5237_R3609
234.6
RHH5266_R3638
118.5
RHH5209_R3580
127.9
Terminal effector memory CD4 T-cell nTPM: 62.9
Samples: 2
Max nTPM: 69.1
Min nTPM: 56.6
RHH5243_R3615
56.6
RHH5272_R3644
69.1
Terminal effector memory CD8 T-cell nTPM: 89.4
Samples: 4
Max nTPM: 110.4
Min nTPM: 66.0
RHH5232_R3604
66.0
RHH5204_R3575
110.4
RHH5261_R3633
85.5
RHH5296_R3662
95.5
Vd2 gdTCR nTPM: 84.0
Samples: 4
Max nTPM: 141.5
Min nTPM: 38.2
RHH5234_R3606
66.8
RHH5206_R3577
89.4
RHH5263_R3635
38.2
RHH5298_R3664
141.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
