We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
89.4
nTPM
Monaco:
221.6
nTPM
Schmiedel:
97.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
89.4
HPA sample
nTPM
gdT-cell nTPM: 85.3
Samples: 6
Max nTPM: 109.8
Min nTPM: 61.2
P10809_1007
61.2
P10809_1022
109.8
P10809_1041
81.5
P10809_1060
91.3
P10809_1077
87.1
P10809_1098
81.0
MAIT T-cell nTPM: 82.8
Samples: 6
Max nTPM: 112.1
Min nTPM: 64.1
P10809_1006
70.5
P10809_1024
112.1
P10809_1043
64.1
P10809_1062
85.7
P10809_1083
70.4
P10809_1097
93.8
Memory CD4 T-cell nTPM: 70.8
Samples: 6
Max nTPM: 78.3
Min nTPM: 64.4
P10809_1014
64.5
P10809_1026
76.1
P10809_1045
64.4
P10809_1064
78.3
P10809_1086
70.2
P10809_1113
71.2
Memory CD8 T-cell nTPM: 89.4
Samples: 5
Max nTPM: 104.0
Min nTPM: 79.1
P10809_1012
84.9
P10809_1027
91.2
P10809_1046
79.1
P10809_1065
104.0
P10809_1111
87.9
Naive CD4 T-cell nTPM: 73.5
Samples: 6
Max nTPM: 80.8
Min nTPM: 62.5
P10809_1015
62.5
P10809_1030
79.4
P10809_1049
65.6
P10809_1068
80.8
P10809_1085
79.9
P10809_1112
72.7
Naive CD8 T-cell nTPM: 83.2
Samples: 6
Max nTPM: 99.0
Min nTPM: 71.1
P10809_1016
71.1
P10809_1031
76.0
P10809_1050
81.4
P10809_1069
99.0
P10809_1087
88.8
P10809_1110
82.6
T-reg nTPM: 72.3
Samples: 6
Max nTPM: 86.6
Min nTPM: 54.2
P10809_1018
67.8
P10809_1037
82.7
P10809_1056
54.2
P10809_1075
86.6
P10809_1094
67.0
P10809_1106
75.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
221.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 180.2
Samples: 4
Max nTPM: 222.7
Min nTPM: 120.8
RHH5202_R3573
222.7
RHH5230_R3602
218.8
RHH5259_R3631
120.8
RHH5288_R3660
158.4
Effector memory CD8 T-cell nTPM: 221.6
Samples: 4
Max nTPM: 288.2
Min nTPM: 165.5
RHH5203_R3574
253.7
RHH5231_R3603
165.5
RHH5260_R3632
178.9
RHH5289_R3661
288.2
MAIT T-cell nTPM: 167.7
Samples: 4
Max nTPM: 187.8
Min nTPM: 139.0
RHH5233_R3605
139.0
RHH5205_R3576
175.3
RHH5262_R3634
187.8
RHH5297_R3663
168.7
Memory CD4 T-cell TFH nTPM: 146.7
Samples: 4
Max nTPM: 171.1
Min nTPM: 124.9
RHH5300_R3666
124.9
RHH5236_R3608
171.1
RHH5265_R3637
141.3
RHH5208_R3579
149.3
Memory CD4 T-cell Th1 nTPM: 152.4
Samples: 4
Max nTPM: 170.3
Min nTPM: 117.7
RHH5210_R3581
163.1
RHH5302_R3668
158.4
RHH5238_R3610
117.7
RHH5267_R3639
170.3
Memory CD4 T-cell Th1/Th17 nTPM: 157.3
Samples: 4
Max nTPM: 168.9
Min nTPM: 149.6
RHH5303_R3669
168.9
RHH5211_R3582
153.6
RHH5239_R3611
149.6
RHH5268_R3640
157.1
Memory CD4 T-cell Th17 nTPM: 146.6
Samples: 4
Max nTPM: 158.8
Min nTPM: 121.5
RHH5304_R3670
158.8
RHH5212_R3583
121.5
RHH5240_R3612
155.5
RHH5269_R3641
150.7
Memory CD4 T-cell Th2 nTPM: 174.5
Samples: 4
Max nTPM: 183.8
Min nTPM: 158.6
RHH5305_R3671
158.6
RHH5213_R3584
179.6
RHH5241_R3613
183.8
RHH5270_R3642
175.8
Naive CD4 T-cell nTPM: 160.7
Samples: 4
Max nTPM: 175.1
Min nTPM: 147.3
RHH5306_R3672
147.3
RHH5214_R3585
175.1
RHH5242_R3614
171.8
RHH5271_R3643
148.6
Naive CD8 T-cell nTPM: 186.7
Samples: 4
Max nTPM: 223.0
Min nTPM: 145.6
RHH5201_R3572
223.0
RHH5229_R3601
145.6
RHH5258_R3630
176.1
RHH5287_R3659
202.0
Non-Vd2 gdTCR nTPM: 215.8
Samples: 4
Max nTPM: 252.6
Min nTPM: 178.7
RHH5235_R3607
237.4
RHH5264_R3636
178.7
RHH5207_R3578
252.6
RHH5299_R3665
194.3
T-reg nTPM: 148.3
Samples: 4
Max nTPM: 178.2
Min nTPM: 134.7
RHH5301_R3667
134.7
RHH5237_R3609
178.2
RHH5266_R3638
141.3
RHH5209_R3580
138.8
Terminal effector memory CD4 T-cell nTPM: 193.6
Samples: 2
Max nTPM: 220.7
Min nTPM: 166.4
RHH5243_R3615
220.7
RHH5272_R3644
166.4
Terminal effector memory CD8 T-cell nTPM: 211.5
Samples: 4
Max nTPM: 239.6
Min nTPM: 188.8
RHH5232_R3604
239.6
RHH5204_R3575
188.8
RHH5261_R3633
221.5
RHH5296_R3662
196.0
Vd2 gdTCR nTPM: 183.7
Samples: 4
Max nTPM: 222.0
Min nTPM: 160.2
RHH5234_R3606
188.0
RHH5206_R3577
164.5
RHH5263_R3635
222.0
RHH5298_R3664
160.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
