HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:8.7 nTPM
HPA Brain:17.1 nTPM
GTEx:8.7 nTPM
FANTOM5:12.5 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:58.8 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.0
1898 Male, age 80, left hemisphere 13.0
2621 Female, age 67, right hemisphere 10.7
1911 Female, age 85, right hemisphere 9.9
2148 Female, age 91, left hemisphere 9.2
1855 Male, age 76, left hemisphere 9.1
2529 Female, age 94, left hemisphere 7.9
Dentate gyrus
nTPM: 11.9
1927 Female, age 91, both hemispheres 15.2
2010 Male, age 76, both hemispheres 13.1
2528 Male, age 74, both hemispheres 12.3
2246 Female, age 85, both hemispheres 11.3
2531 Female, age 67, both hemispheres 10.4
2530 Female, age 94, left hemisphere 9.3
Entorhinal gyrus
nTPM: 10.9
2764 Male, age 80, right hemisphere 14.2
1787 Male, age 76, left hemisphere 14.0
1938 Female, age 85, left hemisphere 11.3
2613 Female, age 94, left hemisphere 11.0
2686 Male, age 75, right hemisphere 7.7
2117 Female, age 91, right hemisphere 7.0
Hippocampus, CA1
nTPM: 13.6
2749 Male, age 80, left hemisphere 21.1
1873 Female, age 85, both hemispheres 12.9
2045 Male, age 76, both hemispheres 12.2
2527 Male, age 74, both hemispheres 11.3
2082 Female, age 91, right hemisphere 10.3
Hippocampus, CA2
nTPM: 11.8
1892 Male, age 76, both hemispheres 15.7
2249 Male, age 74, both hemispheres 13.7
1963 Male, age 80, left hemisphere 12.2
1940 Female, age 85, left hemisphere 12.0
2113 Female, age 91, right hemisphere 9.4
2437 Female, age 94, left hemisphere 8.0
Hippocampus, CA3
nTPM: 11.5
1867 Male, age 76, both hemispheres 13.8
2137 Male, age 80, left hemisphere 12.9
2436 Male, age 74, both hemispheres 12.3
2620 Female, age 94, left hemisphere 12.1
1891 Female, age 85, both hemispheres 11.2
2861 Female, age 67, both hemispheres 6.5
Parahippocampal cortex
nTPM: 11.8
1850 Male, age 80, both hemispheres 17.0
1990 Female, age 91, right hemisphere 14.2
2532 Female, age 72, left hemisphere 12.8
2250 Female, age 67, right hemisphere 12.3
2693 Female, age 94, both hemispheres 12.2
2245 Female, age 91, both hemispheres 11.5
1933 Female, age 85, both hemispheres 11.1
2018 Male, age 76, both hemispheres 11.1
2692 Male, age 74, both hemispheres 8.1
2622 Female, age 67, right hemisphere 7.5
Perirhinal gyrus
nTPM: 17.1
1847 Female, age 91, left hemisphere 25.2
1794 Male, age 80, right hemisphere 18.2
1841 Female, age 85, right hemisphere 15.5
2521 Female, age 94, right hemisphere 14.2
2848 Male, age 76, right hemisphere 12.4
Subiculum
nTPM: 9.4
1977 Female, age 85, both hemispheres 13.6
2438 Female, age 94, left hemisphere 10.3
1901 Male, age 80, both hemispheres 9.3
2619 Male, age 74, both hemispheres 9.2
2042 Male, age 76, both hemispheres 7.1
2729 Female, age 91, right hemisphere 7.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.7
Samples: 197

Max nTPM: 21.7
Min nTPM: 2.5
Std nTPM: 4.1
Median nTPM: 8.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 21.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 20.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 18.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 18.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 17.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 17.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 16.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 16.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 16.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 16.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 16.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.5
FF:10169-103B7 60 years, female 16.6
FF:10153-102I9 76 years, female 8.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 24.0
Min nTPM: 18.8
Sample A Female 24.0
Sample B Female 20.9
Sample C Male 21.6
Sample D Male 18.8
Dorsal hippocampus
nTPM: 20.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 16.3
Sample A Female 23.5
Sample B Female 21.6
Sample C Male 19.7
Sample D Male 16.3
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 20.3
Min nTPM: 14.7
Sample A Female 20.2
Sample B Female 20.3
Sample C Male 17.6
Sample D Male 14.7
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 21.8
Min nTPM: 17.2
Sample A Female 21.2
Sample B Female 17.2
Sample C Male 18.1
Sample D Male 21.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 58.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.8
Samples: 4

Max nTPM: 62.1
Min nTPM: 53.6
Sample A Male 53.6
Sample B Male 60.9
Sample C Female 58.6
Sample D Female 62.1
Hippocampal formation
nTPM: 49.9
Samples: 4

Max nTPM: 60.0
Min nTPM: 45.3
Sample A Male 60.0
Sample B Male 47.4
Sample C Female 46.9
Sample D Female 45.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
69835597 Antisense, RP_050215_01_D10, Mouse strain C57BL/6J (56 days, male) 4.2

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