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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
332.7
nTPM
Monaco:
857.2
nTPM
Schmiedel:
553.4
TPM
T-CELLS - Annotated protein expression
Pending normal tissue analysis
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
332.7
HPA sample
nTPM
gdT-cell nTPM: 60.5
Samples: 6
Max nTPM: 68.2
Min nTPM: 48.7
P10809_1007
68.2
P10809_1022
48.7
P10809_1041
57.7
P10809_1060
67.3
P10809_1077
59.3
P10809_1098
61.9
MAIT T-cell nTPM: 102.4
Samples: 6
Max nTPM: 157.5
Min nTPM: 70.7
P10809_1006
157.5
P10809_1024
70.7
P10809_1043
89.6
P10809_1062
115.5
P10809_1083
73.0
P10809_1097
108.1
Memory CD4 T-cell nTPM: 166.4
Samples: 6
Max nTPM: 281.4
Min nTPM: 107.2
P10809_1014
281.4
P10809_1026
158.3
P10809_1045
107.2
P10809_1064
117.9
P10809_1086
127.3
P10809_1113
206.3
Memory CD8 T-cell nTPM: 85.5
Samples: 5
Max nTPM: 154.7
Min nTPM: 49.7
P10809_1012
154.7
P10809_1027
70.8
P10809_1046
49.7
P10809_1065
59.0
P10809_1111
93.4
Naive CD4 T-cell nTPM: 172.8
Samples: 6
Max nTPM: 265.7
Min nTPM: 72.9
P10809_1015
265.7
P10809_1030
146.5
P10809_1049
72.9
P10809_1068
189.2
P10809_1085
165.4
P10809_1112
196.9
Naive CD8 T-cell nTPM: 113.6
Samples: 6
Max nTPM: 200.6
Min nTPM: 72.5
P10809_1016
200.6
P10809_1031
98.3
P10809_1050
86.3
P10809_1069
100.7
P10809_1087
72.5
P10809_1110
123.4
T-reg nTPM: 332.7
Samples: 6
Max nTPM: 537.0
Min nTPM: 186.8
P10809_1018
537.0
P10809_1037
254.2
P10809_1056
186.8
P10809_1075
235.0
P10809_1094
424.3
P10809_1106
358.8
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
857.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 401.8
Samples: 4
Max nTPM: 450.2
Min nTPM: 320.8
RHH5202_R3573
450.2
RHH5230_R3602
441.0
RHH5259_R3631
395.1
RHH5288_R3660
320.8
Effector memory CD8 T-cell nTPM: 300.4
Samples: 4
Max nTPM: 342.1
Min nTPM: 256.1
RHH5203_R3574
342.1
RHH5231_R3603
283.1
RHH5260_R3632
320.1
RHH5289_R3661
256.1
MAIT T-cell nTPM: 467.5
Samples: 4
Max nTPM: 625.1
Min nTPM: 328.8
RHH5233_R3605
478.2
RHH5205_R3576
625.1
RHH5262_R3634
438.0
RHH5297_R3663
328.8
Memory CD4 T-cell TFH nTPM: 857.2
Samples: 4
Max nTPM: 1044.7
Min nTPM: 667.6
RHH5300_R3666
667.6
RHH5236_R3608
854.8
RHH5265_R3637
861.7
RHH5208_R3579
1044.7
Memory CD4 T-cell Th1 nTPM: 520.9
Samples: 4
Max nTPM: 611.3
Min nTPM: 430.8
RHH5210_R3581
611.3
RHH5302_R3668
471.2
RHH5238_R3610
430.8
RHH5267_R3639
570.4
Memory CD4 T-cell Th1/Th17 nTPM: 584.2
Samples: 4
Max nTPM: 730.3
Min nTPM: 509.5
RHH5303_R3669
528.4
RHH5211_R3582
730.3
RHH5239_R3611
509.5
RHH5268_R3640
568.4
Memory CD4 T-cell Th17 nTPM: 830.4
Samples: 4
Max nTPM: 1004.1
Min nTPM: 710.4
RHH5304_R3670
710.4
RHH5212_R3583
848.1
RHH5240_R3612
1004.1
RHH5269_R3641
758.8
Memory CD4 T-cell Th2 nTPM: 611.6
Samples: 4
Max nTPM: 732.9
Min nTPM: 513.0
RHH5305_R3671
513.0
RHH5213_R3584
732.9
RHH5241_R3613
591.6
RHH5270_R3642
609.0
Naive CD4 T-cell nTPM: 680.5
Samples: 4
Max nTPM: 762.5
Min nTPM: 601.5
RHH5306_R3672
601.5
RHH5214_R3585
762.5
RHH5242_R3614
642.0
RHH5271_R3643
716.1
Naive CD8 T-cell nTPM: 591.0
Samples: 4
Max nTPM: 706.1
Min nTPM: 503.3
RHH5201_R3572
706.1
RHH5229_R3601
618.0
RHH5258_R3630
536.5
RHH5287_R3659
503.3
Non-Vd2 gdTCR nTPM: 276.2
Samples: 4
Max nTPM: 331.7
Min nTPM: 172.9
RHH5235_R3607
280.5
RHH5264_R3636
319.5
RHH5207_R3578
331.7
RHH5299_R3665
172.9
T-reg nTPM: 727.5
Samples: 4
Max nTPM: 836.7
Min nTPM: 540.2
RHH5301_R3667
540.2
RHH5237_R3609
836.7
RHH5266_R3638
774.3
RHH5209_R3580
758.6
Terminal effector memory CD4 T-cell nTPM: 244.0
Samples: 2
Max nTPM: 300.4
Min nTPM: 187.6
RHH5243_R3615
187.6
RHH5272_R3644
300.4
Terminal effector memory CD8 T-cell nTPM: 189.3
Samples: 4
Max nTPM: 211.9
Min nTPM: 168.2
RHH5232_R3604
179.2
RHH5204_R3575
211.9
RHH5261_R3633
197.8
RHH5296_R3662
168.2
Vd2 gdTCR nTPM: 260.1
Samples: 4
Max nTPM: 353.8
Min nTPM: 205.4
RHH5234_R3606
205.4
RHH5206_R3577
268.3
RHH5263_R3635
353.8
RHH5298_R3664
213.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
