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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
168.8
nTPM
Monaco:
511.1
nTPM
Schmiedel:
578.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
168.8
HPA sample
nTPM
gdT-cell nTPM: 122.1
Samples: 6
Max nTPM: 166.1
Min nTPM: 96.0
P10809_1007
105.2
P10809_1022
166.1
P10809_1041
133.7
P10809_1060
96.0
P10809_1077
119.4
P10809_1098
112.4
MAIT T-cell nTPM: 136.0
Samples: 6
Max nTPM: 163.2
Min nTPM: 114.4
P10809_1006
132.6
P10809_1024
155.2
P10809_1043
131.0
P10809_1062
119.7
P10809_1083
114.4
P10809_1097
163.2
Memory CD4 T-cell nTPM: 144.6
Samples: 6
Max nTPM: 165.7
Min nTPM: 130.2
P10809_1014
132.6
P10809_1026
135.3
P10809_1045
165.7
P10809_1064
130.2
P10809_1086
146.5
P10809_1113
157.4
Memory CD8 T-cell nTPM: 132.8
Samples: 5
Max nTPM: 146.4
Min nTPM: 118.1
P10809_1012
137.3
P10809_1027
121.2
P10809_1046
141.2
P10809_1065
118.1
P10809_1111
146.4
Naive CD4 T-cell nTPM: 131.3
Samples: 6
Max nTPM: 168.4
Min nTPM: 116.7
P10809_1015
123.0
P10809_1030
122.9
P10809_1049
168.4
P10809_1068
116.7
P10809_1085
119.3
P10809_1112
137.4
Naive CD8 T-cell nTPM: 141.0
Samples: 6
Max nTPM: 153.8
Min nTPM: 132.2
P10809_1016
137.0
P10809_1031
150.8
P10809_1050
137.1
P10809_1069
135.3
P10809_1087
132.2
P10809_1110
153.8
T-reg nTPM: 168.8
Samples: 6
Max nTPM: 186.4
Min nTPM: 153.6
P10809_1018
163.9
P10809_1037
175.3
P10809_1056
153.6
P10809_1075
161.0
P10809_1094
186.4
P10809_1106
172.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
511.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 440.0
Samples: 4
Max nTPM: 489.3
Min nTPM: 335.3
RHH5202_R3573
489.3
RHH5230_R3602
480.1
RHH5259_R3631
335.3
RHH5288_R3660
455.4
Effector memory CD8 T-cell nTPM: 458.9
Samples: 4
Max nTPM: 510.9
Min nTPM: 354.6
RHH5203_R3574
496.4
RHH5231_R3603
473.5
RHH5260_R3632
354.6
RHH5289_R3661
510.9
MAIT T-cell nTPM: 444.2
Samples: 4
Max nTPM: 492.2
Min nTPM: 366.3
RHH5233_R3605
484.9
RHH5205_R3576
492.2
RHH5262_R3634
433.5
RHH5297_R3663
366.3
Memory CD4 T-cell TFH nTPM: 397.3
Samples: 4
Max nTPM: 426.0
Min nTPM: 368.8
RHH5300_R3666
368.8
RHH5236_R3608
381.0
RHH5265_R3637
413.4
RHH5208_R3579
426.0
Memory CD4 T-cell Th1 nTPM: 412.4
Samples: 4
Max nTPM: 453.2
Min nTPM: 349.5
RHH5210_R3581
418.2
RHH5302_R3668
453.2
RHH5238_R3610
349.5
RHH5267_R3639
428.6
Memory CD4 T-cell Th1/Th17 nTPM: 448.4
Samples: 4
Max nTPM: 512.3
Min nTPM: 392.4
RHH5303_R3669
488.8
RHH5211_R3582
512.3
RHH5239_R3611
392.4
RHH5268_R3640
399.9
Memory CD4 T-cell Th17 nTPM: 495.1
Samples: 4
Max nTPM: 565.5
Min nTPM: 434.6
RHH5304_R3670
490.9
RHH5212_R3583
434.6
RHH5240_R3612
565.5
RHH5269_R3641
489.3
Memory CD4 T-cell Th2 nTPM: 511.1
Samples: 4
Max nTPM: 536.1
Min nTPM: 490.0
RHH5305_R3671
496.6
RHH5213_R3584
490.0
RHH5241_R3613
536.1
RHH5270_R3642
521.6
Naive CD4 T-cell nTPM: 369.7
Samples: 4
Max nTPM: 390.2
Min nTPM: 336.3
RHH5306_R3672
390.2
RHH5214_R3585
385.7
RHH5242_R3614
336.3
RHH5271_R3643
366.7
Naive CD8 T-cell nTPM: 413.5
Samples: 4
Max nTPM: 490.1
Min nTPM: 282.5
RHH5201_R3572
466.6
RHH5229_R3601
282.5
RHH5258_R3630
414.9
RHH5287_R3659
490.1
Non-Vd2 gdTCR nTPM: 428.8
Samples: 4
Max nTPM: 485.5
Min nTPM: 352.7
RHH5235_R3607
456.3
RHH5264_R3636
420.8
RHH5207_R3578
485.5
RHH5299_R3665
352.7
T-reg nTPM: 375.5
Samples: 4
Max nTPM: 419.9
Min nTPM: 330.2
RHH5301_R3667
383.0
RHH5237_R3609
419.9
RHH5266_R3638
368.7
RHH5209_R3580
330.2
Terminal effector memory CD4 T-cell nTPM: 412.4
Samples: 2
Max nTPM: 443.4
Min nTPM: 381.4
RHH5243_R3615
443.4
RHH5272_R3644
381.4
Terminal effector memory CD8 T-cell nTPM: 418.7
Samples: 4
Max nTPM: 486.2
Min nTPM: 331.0
RHH5232_R3604
486.2
RHH5204_R3575
331.0
RHH5261_R3633
414.9
RHH5296_R3662
442.6
Vd2 gdTCR nTPM: 419.0
Samples: 4
Max nTPM: 473.7
Min nTPM: 369.0
RHH5234_R3606
473.7
RHH5206_R3577
437.7
RHH5263_R3635
395.4
RHH5298_R3664
369.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.