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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.5
nTPM
Monaco:
70.3
nTPM
Schmiedel:
36.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.5
HPA sample
nTPM
gdT-cell nTPM: 33.2
Samples: 6
Max nTPM: 43.2
Min nTPM: 24.2
P10809_1007
32.6
P10809_1022
38.4
P10809_1041
24.2
P10809_1060
27.2
P10809_1077
33.8
P10809_1098
43.2
MAIT T-cell nTPM: 46.5
Samples: 6
Max nTPM: 53.0
Min nTPM: 40.0
P10809_1006
53.0
P10809_1024
43.4
P10809_1043
52.3
P10809_1062
40.7
P10809_1083
40.0
P10809_1097
49.3
Memory CD4 T-cell nTPM: 31.2
Samples: 6
Max nTPM: 37.0
Min nTPM: 23.9
P10809_1014
34.3
P10809_1026
37.0
P10809_1045
34.2
P10809_1064
23.9
P10809_1086
25.5
P10809_1113
32.5
Memory CD8 T-cell nTPM: 35.5
Samples: 5
Max nTPM: 43.7
Min nTPM: 27.5
P10809_1012
39.5
P10809_1027
30.7
P10809_1046
36.0
P10809_1065
27.5
P10809_1111
43.7
Naive CD4 T-cell nTPM: 26.5
Samples: 6
Max nTPM: 28.3
Min nTPM: 24.4
P10809_1015
26.3
P10809_1030
24.4
P10809_1049
27.2
P10809_1068
25.4
P10809_1085
27.6
P10809_1112
28.3
Naive CD8 T-cell nTPM: 30.1
Samples: 6
Max nTPM: 35.5
Min nTPM: 25.1
P10809_1016
29.3
P10809_1031
29.4
P10809_1050
29.8
P10809_1069
31.2
P10809_1087
25.1
P10809_1110
35.5
T-reg nTPM: 34.1
Samples: 6
Max nTPM: 54.4
Min nTPM: 26.5
P10809_1018
31.4
P10809_1037
29.1
P10809_1056
35.3
P10809_1075
26.5
P10809_1094
27.8
P10809_1106
54.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
70.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 44.1
Samples: 4
Max nTPM: 50.8
Min nTPM: 28.5
RHH5202_R3573
28.5
RHH5230_R3602
47.8
RHH5259_R3631
50.8
RHH5288_R3660
49.4
Effector memory CD8 T-cell nTPM: 65.5
Samples: 4
Max nTPM: 80.7
Min nTPM: 37.5
RHH5203_R3574
37.5
RHH5231_R3603
71.4
RHH5260_R3632
72.4
RHH5289_R3661
80.7
MAIT T-cell nTPM: 69.2
Samples: 4
Max nTPM: 78.5
Min nTPM: 53.2
RHH5233_R3605
53.2
RHH5205_R3576
69.4
RHH5262_R3634
78.5
RHH5297_R3663
75.8
Memory CD4 T-cell TFH nTPM: 37.3
Samples: 4
Max nTPM: 49.9
Min nTPM: 27.2
RHH5300_R3666
49.9
RHH5236_R3608
30.8
RHH5265_R3637
41.2
RHH5208_R3579
27.2
Memory CD4 T-cell Th1 nTPM: 42.3
Samples: 4
Max nTPM: 46.5
Min nTPM: 32.0
RHH5210_R3581
32.0
RHH5302_R3668
44.7
RHH5238_R3610
46.0
RHH5267_R3639
46.5
Memory CD4 T-cell Th1/Th17 nTPM: 58.8
Samples: 4
Max nTPM: 70.5
Min nTPM: 45.9
RHH5303_R3669
64.5
RHH5211_R3582
45.9
RHH5239_R3611
54.2
RHH5268_R3640
70.5
Memory CD4 T-cell Th17 nTPM: 60.1
Samples: 4
Max nTPM: 63.1
Min nTPM: 56.8
RHH5304_R3670
59.8
RHH5212_R3583
56.8
RHH5240_R3612
60.7
RHH5269_R3641
63.1
Memory CD4 T-cell Th2 nTPM: 54.0
Samples: 4
Max nTPM: 62.0
Min nTPM: 36.5
RHH5305_R3671
58.9
RHH5213_R3584
58.7
RHH5241_R3613
36.5
RHH5270_R3642
62.0
Naive CD4 T-cell nTPM: 41.8
Samples: 4
Max nTPM: 54.4
Min nTPM: 33.4
RHH5306_R3672
33.4
RHH5214_R3585
40.6
RHH5242_R3614
54.4
RHH5271_R3643
38.9
Naive CD8 T-cell nTPM: 35.5
Samples: 4
Max nTPM: 46.8
Min nTPM: 24.9
RHH5201_R3572
24.9
RHH5229_R3601
35.9
RHH5258_R3630
34.4
RHH5287_R3659
46.8
Non-Vd2 gdTCR nTPM: 52.2
Samples: 4
Max nTPM: 64.4
Min nTPM: 45.8
RHH5235_R3607
64.4
RHH5264_R3636
46.3
RHH5207_R3578
45.8
RHH5299_R3665
52.4
T-reg nTPM: 51.7
Samples: 4
Max nTPM: 65.8
Min nTPM: 39.3
RHH5301_R3667
43.2
RHH5237_R3609
65.8
RHH5266_R3638
58.3
RHH5209_R3580
39.3
Terminal effector memory CD4 T-cell nTPM: 70.3
Samples: 2
Max nTPM: 85.2
Min nTPM: 55.4
RHH5243_R3615
85.2
RHH5272_R3644
55.4
Terminal effector memory CD8 T-cell nTPM: 55.6
Samples: 4
Max nTPM: 81.3
Min nTPM: 31.8
RHH5232_R3604
57.1
RHH5204_R3575
31.8
RHH5261_R3633
81.3
RHH5296_R3662
52.3
Vd2 gdTCR nTPM: 56.3
Samples: 4
Max nTPM: 74.8
Min nTPM: 41.5
RHH5234_R3606
41.5
RHH5206_R3577
51.9
RHH5263_R3635
74.8
RHH5298_R3664
56.8
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
