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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
76.5
nTPM
Monaco:
196.8
nTPM
Schmiedel:
88.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
76.5
HPA sample
nTPM
gdT-cell nTPM: 55.5
Samples: 6
Max nTPM: 76.2
Min nTPM: 40.2
P10809_1007
40.2
P10809_1022
61.2
P10809_1041
76.2
P10809_1060
46.9
P10809_1077
41.8
P10809_1098
66.8
MAIT T-cell nTPM: 48.4
Samples: 6
Max nTPM: 59.6
Min nTPM: 42.8
P10809_1006
47.2
P10809_1024
49.5
P10809_1043
42.8
P10809_1062
47.2
P10809_1083
44.2
P10809_1097
59.6
Memory CD4 T-cell nTPM: 24.6
Samples: 6
Max nTPM: 29.8
Min nTPM: 18.5
P10809_1014
18.5
P10809_1026
29.8
P10809_1045
27.9
P10809_1064
24.0
P10809_1086
24.3
P10809_1113
23.0
Memory CD8 T-cell nTPM: 54.3
Samples: 5
Max nTPM: 58.6
Min nTPM: 47.8
P10809_1012
47.8
P10809_1027
57.0
P10809_1046
58.6
P10809_1065
50.4
P10809_1111
57.5
Naive CD4 T-cell nTPM: 36.7
Samples: 6
Max nTPM: 44.9
Min nTPM: 23.6
P10809_1015
23.6
P10809_1030
37.1
P10809_1049
44.9
P10809_1068
39.5
P10809_1085
32.5
P10809_1112
42.4
Naive CD8 T-cell nTPM: 76.5
Samples: 6
Max nTPM: 101.7
Min nTPM: 45.3
P10809_1016
59.3
P10809_1031
101.7
P10809_1050
77.8
P10809_1069
85.5
P10809_1087
45.3
P10809_1110
89.4
T-reg nTPM: 35.1
Samples: 6
Max nTPM: 70.2
Min nTPM: 22.5
P10809_1018
25.8
P10809_1037
30.1
P10809_1056
70.2
P10809_1075
37.2
P10809_1094
24.9
P10809_1106
22.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
196.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 118.4
Samples: 4
Max nTPM: 128.2
Min nTPM: 110.4
RHH5202_R3573
117.2
RHH5230_R3602
110.4
RHH5259_R3631
128.2
RHH5288_R3660
117.7
Effector memory CD8 T-cell nTPM: 123.6
Samples: 4
Max nTPM: 138.5
Min nTPM: 106.1
RHH5203_R3574
115.9
RHH5231_R3603
106.1
RHH5260_R3632
138.5
RHH5289_R3661
133.8
MAIT T-cell nTPM: 104.0
Samples: 4
Max nTPM: 125.4
Min nTPM: 89.6
RHH5233_R3605
95.1
RHH5205_R3576
106.0
RHH5262_R3634
125.4
RHH5297_R3663
89.6
Memory CD4 T-cell TFH nTPM: 69.5
Samples: 4
Max nTPM: 88.5
Min nTPM: 49.3
RHH5300_R3666
55.3
RHH5236_R3608
88.5
RHH5265_R3637
84.7
RHH5208_R3579
49.3
Memory CD4 T-cell Th1 nTPM: 63.5
Samples: 4
Max nTPM: 76.1
Min nTPM: 46.1
RHH5210_R3581
76.1
RHH5302_R3668
46.1
RHH5238_R3610
65.1
RHH5267_R3639
66.7
Memory CD4 T-cell Th1/Th17 nTPM: 60.0
Samples: 4
Max nTPM: 75.3
Min nTPM: 46.1
RHH5303_R3669
55.6
RHH5211_R3582
46.1
RHH5239_R3611
75.3
RHH5268_R3640
63.0
Memory CD4 T-cell Th17 nTPM: 62.0
Samples: 4
Max nTPM: 70.3
Min nTPM: 53.0
RHH5304_R3670
58.4
RHH5212_R3583
53.0
RHH5240_R3612
70.3
RHH5269_R3641
66.2
Memory CD4 T-cell Th2 nTPM: 65.0
Samples: 4
Max nTPM: 73.6
Min nTPM: 58.5
RHH5305_R3671
58.5
RHH5213_R3584
61.0
RHH5241_R3613
73.6
RHH5270_R3642
66.7
Naive CD4 T-cell nTPM: 87.9
Samples: 4
Max nTPM: 92.5
Min nTPM: 79.8
RHH5306_R3672
92.5
RHH5214_R3585
89.3
RHH5242_R3614
90.0
RHH5271_R3643
79.8
Naive CD8 T-cell nTPM: 196.8
Samples: 4
Max nTPM: 227.4
Min nTPM: 177.3
RHH5201_R3572
186.5
RHH5229_R3601
227.4
RHH5258_R3630
177.3
RHH5287_R3659
195.8
Non-Vd2 gdTCR nTPM: 173.2
Samples: 4
Max nTPM: 206.2
Min nTPM: 154.9
RHH5235_R3607
206.2
RHH5264_R3636
169.2
RHH5207_R3578
162.5
RHH5299_R3665
154.9
T-reg nTPM: 79.6
Samples: 4
Max nTPM: 86.7
Min nTPM: 63.4
RHH5301_R3667
63.4
RHH5237_R3609
85.9
RHH5266_R3638
86.7
RHH5209_R3580
82.2
Terminal effector memory CD4 T-cell nTPM: 105.3
Samples: 2
Max nTPM: 139.3
Min nTPM: 71.2
RHH5243_R3615
139.3
RHH5272_R3644
71.2
Terminal effector memory CD8 T-cell nTPM: 152.4
Samples: 4
Max nTPM: 203.4
Min nTPM: 123.2
RHH5232_R3604
142.8
RHH5204_R3575
123.2
RHH5261_R3633
203.4
RHH5296_R3662
140.3
Vd2 gdTCR nTPM: 116.1
Samples: 4
Max nTPM: 158.9
Min nTPM: 82.9
RHH5234_R3606
102.5
RHH5206_R3577
82.9
RHH5263_R3635
158.9
RHH5298_R3664
120.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
