HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:55.6 nTPM
HPA Brain:45.2 nTPM
GTEx:55.6 nTPM
FANTOM5:68.1 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:52.9 nTPM
Allen mouse:4.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000504
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.2
Sample id Sample description nTPM
Hippocampus
nTPM: 44.0
2529 Female, age 94, left hemisphere 54.9
1898 Male, age 80, left hemisphere 47.1
1855 Male, age 76, left hemisphere 41.5
1911 Female, age 85, right hemisphere 41.5
2148 Female, age 91, left hemisphere 40.6
2621 Female, age 67, right hemisphere 38.2
Dentate gyrus
nTPM: 41.8
2530 Female, age 94, left hemisphere 46.6
2010 Male, age 76, both hemispheres 44.5
2246 Female, age 85, both hemispheres 40.9
2528 Male, age 74, both hemispheres 40.1
1927 Female, age 91, both hemispheres 39.6
2531 Female, age 67, both hemispheres 38.8
Entorhinal gyrus
nTPM: 38.8
2686 Male, age 75, right hemisphere 46.4
2117 Female, age 91, right hemisphere 42.8
1938 Female, age 85, left hemisphere 40.6
2764 Male, age 80, right hemisphere 37.0
1787 Male, age 76, left hemisphere 36.8
2613 Female, age 94, left hemisphere 29.2
Hippocampus, CA1
nTPM: 43.8
2045 Male, age 76, both hemispheres 48.1
2527 Male, age 74, both hemispheres 46.9
2749 Male, age 80, left hemisphere 45.4
1873 Female, age 85, both hemispheres 44.2
2082 Female, age 91, right hemisphere 34.4
Hippocampus, CA2
nTPM: 39.4
2437 Female, age 94, left hemisphere 46.3
1892 Male, age 76, both hemispheres 43.5
2249 Male, age 74, both hemispheres 38.0
2113 Female, age 91, right hemisphere 37.8
1940 Female, age 85, left hemisphere 35.6
1963 Male, age 80, left hemisphere 35.2
Hippocampus, CA3
nTPM: 37.4
1867 Male, age 76, both hemispheres 42.3
2137 Male, age 80, left hemisphere 41.5
1891 Female, age 85, both hemispheres 40.2
2861 Female, age 67, both hemispheres 33.9
2436 Male, age 74, both hemispheres 33.4
2620 Female, age 94, left hemisphere 32.9
Parahippocampal cortex
nTPM: 38.6
2245 Female, age 91, both hemispheres 46.5
1850 Male, age 80, both hemispheres 43.0
1933 Female, age 85, both hemispheres 42.4
2250 Female, age 67, right hemisphere 39.6
2018 Male, age 76, both hemispheres 39.3
1990 Female, age 91, right hemisphere 38.4
2692 Male, age 74, both hemispheres 38.1
2532 Female, age 72, left hemisphere 36.0
2622 Female, age 67, right hemisphere 32.5
2693 Female, age 94, both hemispheres 30.3
Perirhinal gyrus
nTPM: 40.0
1841 Female, age 85, right hemisphere 42.7
1847 Female, age 91, left hemisphere 42.1
2848 Male, age 76, right hemisphere 41.0
1794 Male, age 80, right hemisphere 38.6
2521 Female, age 94, right hemisphere 35.8
Subiculum
nTPM: 45.2
2438 Female, age 94, left hemisphere 75.7
1901 Male, age 80, both hemispheres 41.9
2042 Male, age 76, both hemispheres 41.7
2729 Female, age 91, right hemisphere 39.7
1977 Female, age 85, both hemispheres 36.7
2619 Male, age 74, both hemispheres 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.6
Samples: 197

Max nTPM: 120.8
Min nTPM: 28.2
Std nTPM: 10.8
Median nTPM: 53.1
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 120.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 101.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 90.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 88.2
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 77.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 77.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 75.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 74.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 73.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 72.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 72.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.1
FF:10169-103B7 60 years, female 77.8
FF:10153-102I9 76 years, female 58.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Subiculum
nTPM: 26.3
Samples: 4

Max nTPM: 33.2
Min nTPM: 21.9
Sample A Female 33.2
Sample B Female 25.4
Sample C Male 24.5
Sample D Male 21.9
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 35.4
Min nTPM: 20.8
Sample A Female 35.4
Sample B Female 24.2
Sample C Male 30.5
Sample D Male 20.8
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 24.5
Min nTPM: 20.8
Sample A Female 22.1
Sample B Female 24.5
Sample C Male 21.7
Sample D Male 20.8
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 27.6
Min nTPM: 20.5
Sample A Female 24.7
Sample B Female 20.5
Sample C Male 27.6
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 47.3
Samples: 4

Max nTPM: 50.3
Min nTPM: 45.2
Sample A Male 47.4
Sample B Male 46.4
Sample C Female 45.2
Sample D Female 50.3
Hippocampal formation
nTPM: 53.0
Samples: 4

Max nTPM: 58.1
Min nTPM: 47.2
Sample A Male 49.2
Sample B Male 57.3
Sample C Female 58.1
Sample D Female 47.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.6
69059923 Antisense, RP_050317_04_E04, Mouse strain C57BL/6J (56 days, male) 4.6

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