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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
80.5
nTPM
Monaco:
318.0
nTPM
Schmiedel:
5181.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
80.5
HPA sample
nTPM
gdT-cell nTPM: 26.4
Samples: 6
Max nTPM: 51.2
Min nTPM: 8.9
P10809_1007
22.9
P10809_1022
51.2
P10809_1041
22.6
P10809_1060
22.4
P10809_1077
8.9
P10809_1098
30.5
MAIT T-cell nTPM: 64.5
Samples: 6
Max nTPM: 91.2
Min nTPM: 46.1
P10809_1006
67.5
P10809_1024
91.2
P10809_1043
66.3
P10809_1062
65.4
P10809_1083
46.1
P10809_1097
50.2
Memory CD4 T-cell nTPM: 80.5
Samples: 6
Max nTPM: 101.6
Min nTPM: 67.2
P10809_1014
101.6
P10809_1026
67.2
P10809_1045
95.5
P10809_1064
69.6
P10809_1086
77.4
P10809_1113
71.4
Memory CD8 T-cell nTPM: 11.8
Samples: 5
Max nTPM: 18.6
Min nTPM: 6.4
P10809_1012
18.6
P10809_1027
9.8
P10809_1046
17.5
P10809_1065
6.6
P10809_1111
6.4
Naive CD4 T-cell nTPM: 76.3
Samples: 6
Max nTPM: 96.1
Min nTPM: 63.7
P10809_1015
96.1
P10809_1030
78.5
P10809_1049
63.7
P10809_1068
77.9
P10809_1085
69.8
P10809_1112
71.8
Naive CD8 T-cell nTPM: 0.7
Samples: 6
Max nTPM: 1.9
Min nTPM: 0.0
P10809_1016
0.3
P10809_1031
1.9
P10809_1050
0.4
P10809_1069
0.0
P10809_1087
0.3
P10809_1110
1.3
T-reg nTPM: 10.7
Samples: 6
Max nTPM: 19.2
Min nTPM: 7.2
P10809_1018
8.7
P10809_1037
10.7
P10809_1056
19.2
P10809_1075
7.2
P10809_1094
7.8
P10809_1106
10.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
318.0
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 36.9
Samples: 4
Max nTPM: 74.2
Min nTPM: 17.8
RHH5202_R3573
17.8
RHH5230_R3602
26.6
RHH5259_R3631
29.1
RHH5288_R3660
74.2
Effector memory CD8 T-cell nTPM: 24.2
Samples: 4
Max nTPM: 39.9
Min nTPM: 10.3
RHH5203_R3574
12.2
RHH5231_R3603
10.3
RHH5260_R3632
39.9
RHH5289_R3661
34.3
MAIT T-cell nTPM: 224.1
Samples: 4
Max nTPM: 244.5
Min nTPM: 203.8
RHH5233_R3605
209.6
RHH5205_R3576
203.8
RHH5262_R3634
238.6
RHH5297_R3663
244.5
Memory CD4 T-cell TFH nTPM: 272.5
Samples: 4
Max nTPM: 334.3
Min nTPM: 232.9
RHH5300_R3666
334.3
RHH5236_R3608
252.3
RHH5265_R3637
232.9
RHH5208_R3579
270.6
Memory CD4 T-cell Th1 nTPM: 188.4
Samples: 4
Max nTPM: 248.8
Min nTPM: 109.1
RHH5210_R3581
158.6
RHH5302_R3668
248.8
RHH5238_R3610
109.1
RHH5267_R3639
237.0
Memory CD4 T-cell Th1/Th17 nTPM: 292.0
Samples: 4
Max nTPM: 392.3
Min nTPM: 164.8
RHH5303_R3669
392.3
RHH5211_R3582
305.1
RHH5239_R3611
164.8
RHH5268_R3640
305.7
Memory CD4 T-cell Th17 nTPM: 318.0
Samples: 4
Max nTPM: 398.2
Min nTPM: 273.2
RHH5304_R3670
398.2
RHH5212_R3583
273.2
RHH5240_R3612
307.2
RHH5269_R3641
293.5
Memory CD4 T-cell Th2 nTPM: 297.0
Samples: 4
Max nTPM: 332.4
Min nTPM: 236.4
RHH5305_R3671
316.0
RHH5213_R3584
303.2
RHH5241_R3613
236.4
RHH5270_R3642
332.4
Naive CD4 T-cell nTPM: 231.8
Samples: 4
Max nTPM: 300.3
Min nTPM: 168.8
RHH5306_R3672
300.3
RHH5214_R3585
168.8
RHH5242_R3614
222.3
RHH5271_R3643
235.9
Naive CD8 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 3.6
Min nTPM: 0.5
RHH5201_R3572
0.6
RHH5229_R3601
0.5
RHH5258_R3630
1.8
RHH5287_R3659
3.6
Non-Vd2 gdTCR nTPM: 10.3
Samples: 4
Max nTPM: 20.8
Min nTPM: 5.3
RHH5235_R3607
20.8
RHH5264_R3636
6.2
RHH5207_R3578
5.3
RHH5299_R3665
8.8
T-reg nTPM: 109.1
Samples: 4
Max nTPM: 120.5
Min nTPM: 98.1
RHH5301_R3667
120.5
RHH5237_R3609
111.7
RHH5266_R3638
106.0
RHH5209_R3580
98.1
Terminal effector memory CD4 T-cell nTPM: 167.0
Samples: 2
Max nTPM: 258.0
Min nTPM: 76.0
RHH5243_R3615
76.0
RHH5272_R3644
258.0
Terminal effector memory CD8 T-cell nTPM: 1.6
Samples: 4
Max nTPM: 2.7
Min nTPM: 0.5
RHH5232_R3604
2.4
RHH5204_R3575
0.5
RHH5261_R3633
2.7
RHH5296_R3662
0.6
Vd2 gdTCR nTPM: 121.1
Samples: 4
Max nTPM: 162.3
Min nTPM: 50.1
RHH5234_R3606
121.1
RHH5206_R3577
50.1
RHH5263_R3635
150.7
RHH5298_R3664
162.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
