We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
225.4
nTPM
Monaco:
120.3
nTPM
Schmiedel:
154.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
225.4
HPA sample
nTPM
gdT-cell nTPM: 139.8
Samples: 6
Max nTPM: 223.2
Min nTPM: 87.3
P10809_1007
96.4
P10809_1022
173.9
P10809_1041
223.2
P10809_1060
97.2
P10809_1077
87.3
P10809_1098
160.8
MAIT T-cell nTPM: 138.1
Samples: 6
Max nTPM: 204.5
Min nTPM: 87.3
P10809_1006
87.3
P10809_1024
155.4
P10809_1043
140.9
P10809_1062
118.8
P10809_1083
121.6
P10809_1097
204.5
Memory CD4 T-cell nTPM: 225.4
Samples: 6
Max nTPM: 314.0
Min nTPM: 155.1
P10809_1014
190.8
P10809_1026
314.0
P10809_1045
258.4
P10809_1064
195.6
P10809_1086
155.1
P10809_1113
238.3
Memory CD8 T-cell nTPM: 122.9
Samples: 5
Max nTPM: 137.9
Min nTPM: 107.0
P10809_1012
107.0
P10809_1027
118.3
P10809_1046
132.6
P10809_1065
137.9
P10809_1111
118.6
Naive CD4 T-cell nTPM: 73.3
Samples: 6
Max nTPM: 113.7
Min nTPM: 50.6
P10809_1015
50.6
P10809_1030
113.7
P10809_1049
84.5
P10809_1068
67.5
P10809_1085
65.0
P10809_1112
58.5
Naive CD8 T-cell nTPM: 65.6
Samples: 6
Max nTPM: 118.9
Min nTPM: 36.2
P10809_1016
36.2
P10809_1031
118.9
P10809_1050
59.8
P10809_1069
74.7
P10809_1087
51.5
P10809_1110
52.7
T-reg nTPM: 104.3
Samples: 6
Max nTPM: 188.5
Min nTPM: 56.4
P10809_1018
67.7
P10809_1037
146.1
P10809_1056
188.5
P10809_1075
92.3
P10809_1094
74.8
P10809_1106
56.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
120.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 47.1
Samples: 4
Max nTPM: 69.1
Min nTPM: 31.6
RHH5202_R3573
31.6
RHH5230_R3602
51.4
RHH5259_R3631
36.2
RHH5288_R3660
69.1
Effector memory CD8 T-cell nTPM: 26.5
Samples: 4
Max nTPM: 39.6
Min nTPM: 10.9
RHH5203_R3574
10.9
RHH5231_R3603
35.8
RHH5260_R3632
39.6
RHH5289_R3661
19.6
MAIT T-cell nTPM: 44.4
Samples: 4
Max nTPM: 78.4
Min nTPM: 25.7
RHH5233_R3605
34.5
RHH5205_R3576
25.7
RHH5262_R3634
38.9
RHH5297_R3663
78.4
Memory CD4 T-cell TFH nTPM: 62.4
Samples: 4
Max nTPM: 88.9
Min nTPM: 37.3
RHH5300_R3666
81.5
RHH5236_R3608
88.9
RHH5265_R3637
37.3
RHH5208_R3579
41.7
Memory CD4 T-cell Th1 nTPM: 87.3
Samples: 4
Max nTPM: 144.2
Min nTPM: 51.2
RHH5210_R3581
51.2
RHH5302_R3668
144.2
RHH5238_R3610
89.6
RHH5267_R3639
64.3
Memory CD4 T-cell Th1/Th17 nTPM: 120.3
Samples: 4
Max nTPM: 185.3
Min nTPM: 92.4
RHH5303_R3669
185.3
RHH5211_R3582
92.9
RHH5239_R3611
92.4
RHH5268_R3640
110.5
Memory CD4 T-cell Th17 nTPM: 97.2
Samples: 4
Max nTPM: 116.9
Min nTPM: 65.7
RHH5304_R3670
113.1
RHH5212_R3583
116.9
RHH5240_R3612
93.1
RHH5269_R3641
65.7
Memory CD4 T-cell Th2 nTPM: 106.3
Samples: 4
Max nTPM: 137.9
Min nTPM: 80.9
RHH5305_R3671
137.9
RHH5213_R3584
92.6
RHH5241_R3613
113.9
RHH5270_R3642
80.9
Naive CD4 T-cell nTPM: 39.5
Samples: 4
Max nTPM: 60.7
Min nTPM: 18.9
RHH5306_R3672
60.7
RHH5214_R3585
46.1
RHH5242_R3614
32.3
RHH5271_R3643
18.9
Naive CD8 T-cell nTPM: 20.0
Samples: 4
Max nTPM: 26.1
Min nTPM: 14.5
RHH5201_R3572
14.5
RHH5229_R3601
18.3
RHH5258_R3630
21.0
RHH5287_R3659
26.1
Non-Vd2 gdTCR nTPM: 35.2
Samples: 4
Max nTPM: 51.8
Min nTPM: 21.9
RHH5235_R3607
29.9
RHH5264_R3636
37.1
RHH5207_R3578
21.9
RHH5299_R3665
51.8
T-reg nTPM: 62.5
Samples: 4
Max nTPM: 97.7
Min nTPM: 38.5
RHH5301_R3667
97.7
RHH5237_R3609
70.0
RHH5266_R3638
43.6
RHH5209_R3580
38.5
Terminal effector memory CD4 T-cell nTPM: 43.5
Samples: 2
Max nTPM: 59.4
Min nTPM: 27.5
RHH5243_R3615
27.5
RHH5272_R3644
59.4
Terminal effector memory CD8 T-cell nTPM: 45.0
Samples: 4
Max nTPM: 60.9
Min nTPM: 28.7
RHH5232_R3604
28.7
RHH5204_R3575
38.8
RHH5261_R3633
60.9
RHH5296_R3662
51.4
Vd2 gdTCR nTPM: 62.4
Samples: 4
Max nTPM: 100.5
Min nTPM: 37.7
RHH5234_R3606
39.5
RHH5206_R3577
71.9
RHH5263_R3635
37.7
RHH5298_R3664
100.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
