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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
148.5
nTPM
FANTOM5:
163.9
Scaled Tags Per Million
Allen mouse:
7.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
148.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 88.3
2090
Male, age 80, both hemispheres
91.0
2301
Female, age 85, both hemispheres
88.9
2188
Female, age 91, both hemispheres
88.6
1984
Male, age 76, both hemispheres
84.6
Dorsal cochlear nucleus nTPM: 84.0
2058
Male, age 76, both hemispheres
96.8
2187
Female, age 91, both hemispheres
89.3
2802
Male, age 74, right hemisphere
84.1
2370
Male, age 61, both hemispheres
78.2
2378
Male, age 80, both hemispheres
71.4
Dorsal tegmental nucleus nTPM: 94.7
2083
Male, age 80, both hemispheres
114.1
2326
Male, age 74, both hemispheres
89.2
1936
Male, age 76, left hemisphere
88.7
2358
Male, age 61, both hemispheres
86.5
Dorsolateral tegmental area nTPM: 100.3
2751
Female, age 85, both hemispheres
110.2
2654
Male, age 80, both hemispheres
105.9
2141
Male, age 76, both hemispheres
103.2
2360
Male, age 74, both hemispheres
97.7
2337
Male, age 61, both hemispheres
84.7
Kolliker-Fuse nucleus nTPM: 108.3
2163
Male, age 80, both hemispheres
120.5
2315
Male, age 76, right hemisphere
118.9
2793
Female, age 91, left hemisphere
85.6
Lateral lemniscal nuclei nTPM: 126.0
2169
Male, age 76, both hemispheres
154.0
2746
Female, age 85, left hemisphere
145.9
2036
Male, age 80, both hemispheres
142.8
2453
Male, age 74, right hemisphere
102.6
2320
Female, age 91, left hemisphere
84.3
Lateral parabrachial nucleus nTPM: 105.7
2139
Female, age 85, right hemisphere
162.3
2013
Male, age 80, both hemispheres
109.0
2790
Male, age 61, both hemispheres
79.8
2792
Male, age 76, both hemispheres
71.7
Lateral vestibular nucleus nTPM: 99.5
2184
Male, age 76, both hemispheres
103.4
2311
Male, age 80, both hemispheres
95.6
Locus coeruleus nTPM: 120.7
2123
Female, age 91, both hemispheres
157.7
2014
Male, age 55, unknown
137.8
2788
Male, age 74, unknown
129.9
1980
Male, age 76, both hemispheres
113.6
2317
Female, age 72, unknown
107.5
2162
Male, age 80, both hemispheres
105.7
2720
Male, age 74, both hemispheres
92.7
Medial parabrachial nucleus nTPM: 98.1
2854
Male, age 80, both hemispheres
113.6
2170
Female, age 91, both hemispheres
99.6
2463
Female, age 85, right hemisphere
95.0
2786
Male, age 76, both hemispheres
91.7
2156
Male, age 61, both hemispheres
90.7
Medial periolivary nuclei nTPM: 128.5
2171
Female, age 85, both hemispheres
177.5
2063
Male, age 76, both hemispheres
176.7
2791
Male, age 74, right hemisphere
107.6
2081
Male, age 80, both hemispheres
102.7
2458
Female, age 91, both hemispheres
77.9
Motor facial nucleus nTPM: 119.5
2062
Male, age 76, both hemispheres
182.3
2327
Male, age 80, both hemispheres
120.4
2365
Male, age 74, right hemisphere
116.7
2697
Female, age 85, both hemispheres
113.4
2126
Male, age 61, both hemispheres
102.1
2795
Female, age 91, both hemispheres
82.0
Motor trigeminal nucleus nTPM: 101.8
2079
Male, age 80, both hemispheres
136.5
2335
Male, age 61, both hemispheres
102.7
2309
Male, age 76, both hemispheres
101.1
2560
Male, age 74, both hemispheres
89.8
2321
Female, age 91, both hemispheres
79.0
Nuclei of the trapezoid body nTPM: 148.5
2735
Female, age 85, both hemispheres
190.0
2159
Male, age 61, both hemispheres
189.4
1983
Male, age 76, both hemispheres
170.2
2166
Male, age 80, both hemispheres
117.1
2368
Female, age 91, both hemispheres
75.7
Nucleus raphe magnus nTPM: 141.3
2160
Male, age 61, both hemispheres
196.9
2172
Female, age 85, both hemispheres
183.3
2455
Male, age 74, both hemispheres
142.2
2328
Male, age 80, both hemispheres
121.3
2051
Male, age 76, both hemispheres
119.0
2459
Female, age 91, both hemispheres
85.3
Paramedian reticular nucleus nTPM: 119.9
2050
Female, age 85, both hemispheres
144.9
2057
Male, age 80, both hemispheres
131.6
2313
Male, age 61, both hemispheres
120.4
2052
Male, age 76, both hemispheres
82.6
Pedunculopontine tegmental nucleus nTPM: 101.6
2334
Male, age 80, both hemispheres
104.8
2338
Male, age 61, both hemispheres
103.9
1921
Female, age 85, both hemispheres
96.1
Pontine nuclei nTPM: 146.6
2787
Female, age 85, both hemispheres
199.9
2727
Male, age 61, right hemisphere
189.3
1863
Male, age 55, unknown
173.4
2109
Female, age 72, unknown
161.8
1968
Male, age 76, left hemisphere
142.8
2454
Male, age 74, left hemisphere
107.4
2115
Male, age 80, left hemisphere
105.2
2319
Female, age 91, both hemispheres
92.9
Pontine raphe nucleus nTPM: 137.8
2122
Female, age 85, midline
169.7
2853
Male, age 76, midline
105.9
Posteroventral cochlear nucleus nTPM: 93.2
2752
Female, age 85, both hemispheres
137.2
2070
Male, age 76, both hemispheres
111.2
2341
Male, age 80, both hemispheres
78.1
2371
Male, age 61, both hemispheres
71.2
2135
Female, age 91, both hemispheres
68.2
Principal sensory trigeminal nucleus nTPM: 122.4
2158
Male, age 61, both hemispheres
170.9
2008
Male, age 80, left hemisphere
144.7
2324
Male, age 76, both hemispheres
93.6
2367
Female, age 91, left hemisphere
80.3
Reticular pontine nucleus, caudal nTPM: 108.0
2092
Male, age 76, both hemispheres
141.7
2332
Male, age 80, right hemisphere
124.8
2559
Male, age 74, both hemispheres
83.8
2457
Female, age 91, both hemispheres
81.7
Reticular pontine nucleus, oral nTPM: 109.7
2012
Female, age 85, both hemispheres
141.5
2361
Male, age 74, both hemispheres
117.4
1939
Male, age 80, both hemispheres
107.8
2167
Male, age 76, both hemispheres
99.1
2366
Female, age 91, both hemispheres
82.9
Reticulotegmental nucleus nTPM: 98.9
2325
Male, age 76, both hemispheres
118.1
2333
Male, age 80, both hemispheres
97.2
2452
Male, age 74, both hemispheres
92.2
2322
Female, age 91, both hemispheres
88.3
Spinal trigeminal nucleus, oral nTPM: 102.1
2737
Female, age 85, both hemispheres
110.7
2164
Male, age 80, both hemispheres
104.4
1978
Male, age 76, both hemispheres
91.3
Subcoeruleus area nTPM: 108.2
1958
Male, age 80, both hemispheres
125.5
2323
Female, age 91, left hemisphere
119.9
2089
Male, age 76, left hemisphere
118.2
2369
Female, age 85, left hemisphere
94.8
2451
Male, age 74, both hemispheres
82.8
Superior olive nTPM: 122.3
1875
Female, age 85, both hemispheres
172.1
2020
Male, age 76, both hemispheres
128.4
2364
Male, age 74, right hemisphere
118.3
2329
Male, age 80, right hemisphere
111.1
2561
Female, age 91, both hemispheres
81.5
Ventral periolivary nuclei nTPM: 134.5
2130
Female, age 85, both hemispheres
179.0
2165
Male, age 80, both hemispheres
151.9
2023
Male, age 76, both hemispheres
121.6
2794
Female, age 91, left hemisphere
85.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 104.9
1959
Male, age 76, both hemispheres
126.3
2449
Male, age 74, both hemispheres
118.6
2161
Male, age 80, both hemispheres
113.6
2840
Female, age 85, both hemispheres
112.7
2359
Male, age 61, both hemispheres
83.7
2456
Female, age 91, both hemispheres
74.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
