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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
119.3
nTPM
Monaco:
230.9
nTPM
Schmiedel:
135.1
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
119.3
HPA sample
nTPM
gdT-cell nTPM: 119.3
Samples: 6
Max nTPM: 161.7
Min nTPM: 76.1
P10809_1007
76.1
P10809_1022
161.7
P10809_1041
148.1
P10809_1060
98.3
P10809_1077
104.9
P10809_1098
126.6
MAIT T-cell nTPM: 91.9
Samples: 6
Max nTPM: 111.2
Min nTPM: 57.3
P10809_1006
57.3
P10809_1024
101.0
P10809_1043
111.2
P10809_1062
95.1
P10809_1083
92.9
P10809_1097
94.0
Memory CD4 T-cell nTPM: 98.3
Samples: 6
Max nTPM: 137.8
Min nTPM: 79.8
P10809_1014
79.8
P10809_1026
137.8
P10809_1045
107.5
P10809_1064
89.0
P10809_1086
80.4
P10809_1113
95.4
Memory CD8 T-cell nTPM: 112.1
Samples: 5
Max nTPM: 149.7
Min nTPM: 90.0
P10809_1012
91.5
P10809_1027
149.7
P10809_1046
125.2
P10809_1065
90.0
P10809_1111
104.1
Naive CD4 T-cell nTPM: 97.6
Samples: 6
Max nTPM: 126.7
Min nTPM: 68.2
P10809_1015
68.2
P10809_1030
126.7
P10809_1049
126.1
P10809_1068
83.4
P10809_1085
84.1
P10809_1112
97.0
Naive CD8 T-cell nTPM: 112.4
Samples: 6
Max nTPM: 158.9
Min nTPM: 73.9
P10809_1016
73.9
P10809_1031
158.9
P10809_1050
116.1
P10809_1069
115.6
P10809_1087
90.2
P10809_1110
119.4
T-reg nTPM: 109.2
Samples: 6
Max nTPM: 189.8
Min nTPM: 86.1
P10809_1018
86.1
P10809_1037
95.3
P10809_1056
189.8
P10809_1075
89.4
P10809_1094
88.3
P10809_1106
106.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
230.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 162.9
Samples: 4
Max nTPM: 184.7
Min nTPM: 141.8
RHH5202_R3573
160.0
RHH5230_R3602
184.7
RHH5259_R3631
141.8
RHH5288_R3660
165.1
Effector memory CD8 T-cell nTPM: 202.5
Samples: 4
Max nTPM: 254.3
Min nTPM: 156.5
RHH5203_R3574
156.5
RHH5231_R3603
211.4
RHH5260_R3632
187.6
RHH5289_R3661
254.3
MAIT T-cell nTPM: 139.2
Samples: 4
Max nTPM: 149.4
Min nTPM: 127.0
RHH5233_R3605
131.6
RHH5205_R3576
149.4
RHH5262_R3634
148.8
RHH5297_R3663
127.0
Memory CD4 T-cell TFH nTPM: 153.1
Samples: 4
Max nTPM: 175.8
Min nTPM: 128.4
RHH5300_R3666
128.4
RHH5236_R3608
175.8
RHH5265_R3637
136.0
RHH5208_R3579
172.0
Memory CD4 T-cell Th1 nTPM: 131.1
Samples: 4
Max nTPM: 147.9
Min nTPM: 102.2
RHH5210_R3581
147.9
RHH5302_R3668
102.2
RHH5238_R3610
144.9
RHH5267_R3639
129.4
Memory CD4 T-cell Th1/Th17 nTPM: 151.5
Samples: 4
Max nTPM: 174.0
Min nTPM: 127.0
RHH5303_R3669
161.2
RHH5211_R3582
174.0
RHH5239_R3611
127.0
RHH5268_R3640
143.7
Memory CD4 T-cell Th17 nTPM: 161.4
Samples: 4
Max nTPM: 223.6
Min nTPM: 117.3
RHH5304_R3670
164.8
RHH5212_R3583
139.8
RHH5240_R3612
223.6
RHH5269_R3641
117.3
Memory CD4 T-cell Th2 nTPM: 152.8
Samples: 4
Max nTPM: 178.0
Min nTPM: 126.8
RHH5305_R3671
140.2
RHH5213_R3584
166.1
RHH5241_R3613
178.0
RHH5270_R3642
126.8
Naive CD4 T-cell nTPM: 135.7
Samples: 4
Max nTPM: 150.0
Min nTPM: 111.3
RHH5306_R3672
136.7
RHH5214_R3585
144.8
RHH5242_R3614
111.3
RHH5271_R3643
150.0
Naive CD8 T-cell nTPM: 165.9
Samples: 4
Max nTPM: 187.8
Min nTPM: 148.8
RHH5201_R3572
187.8
RHH5229_R3601
148.8
RHH5258_R3630
169.0
RHH5287_R3659
157.8
Non-Vd2 gdTCR nTPM: 230.9
Samples: 4
Max nTPM: 257.6
Min nTPM: 193.0
RHH5235_R3607
249.3
RHH5264_R3636
223.6
RHH5207_R3578
257.6
RHH5299_R3665
193.0
T-reg nTPM: 154.4
Samples: 4
Max nTPM: 176.9
Min nTPM: 138.4
RHH5301_R3667
138.4
RHH5237_R3609
176.9
RHH5266_R3638
142.9
RHH5209_R3580
159.5
Terminal effector memory CD4 T-cell nTPM: 190.6
Samples: 2
Max nTPM: 203.0
Min nTPM: 178.2
RHH5243_R3615
203.0
RHH5272_R3644
178.2
Terminal effector memory CD8 T-cell nTPM: 208.9
Samples: 4
Max nTPM: 227.7
Min nTPM: 182.9
RHH5232_R3604
227.7
RHH5204_R3575
182.9
RHH5261_R3633
203.6
RHH5296_R3662
221.5
Vd2 gdTCR nTPM: 149.1
Samples: 4
Max nTPM: 178.5
Min nTPM: 105.4
RHH5234_R3606
162.4
RHH5206_R3577
150.1
RHH5263_R3635
178.5
RHH5298_R3664
105.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
