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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
68.5
nTPM
Monaco:
111.1
nTPM
Schmiedel:
121.3
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
68.5
HPA sample
nTPM
gdT-cell nTPM: 68.5
Samples: 6
Max nTPM: 81.9
Min nTPM: 50.3
P10809_1007
50.3
P10809_1022
66.8
P10809_1041
81.9
P10809_1060
80.8
P10809_1077
74.0
P10809_1098
57.4
MAIT T-cell nTPM: 50.7
Samples: 6
Max nTPM: 74.8
Min nTPM: 39.4
P10809_1006
39.4
P10809_1024
52.8
P10809_1043
45.2
P10809_1062
48.1
P10809_1083
43.9
P10809_1097
74.8
Memory CD4 T-cell nTPM: 61.2
Samples: 6
Max nTPM: 74.5
Min nTPM: 41.3
P10809_1014
41.3
P10809_1026
65.2
P10809_1045
74.5
P10809_1064
65.9
P10809_1086
62.7
P10809_1113
57.6
Memory CD8 T-cell nTPM: 67.8
Samples: 5
Max nTPM: 82.7
Min nTPM: 47.9
P10809_1012
47.9
P10809_1027
82.7
P10809_1046
69.4
P10809_1065
82.3
P10809_1111
56.8
Naive CD4 T-cell nTPM: 62.1
Samples: 6
Max nTPM: 84.5
Min nTPM: 37.1
P10809_1015
37.1
P10809_1030
68.2
P10809_1049
84.5
P10809_1068
60.0
P10809_1085
72.0
P10809_1112
50.5
Naive CD8 T-cell nTPM: 59.6
Samples: 6
Max nTPM: 73.6
Min nTPM: 37.5
P10809_1016
37.5
P10809_1031
61.1
P10809_1050
73.6
P10809_1069
73.3
P10809_1087
58.8
P10809_1110
53.3
T-reg nTPM: 57.2
Samples: 6
Max nTPM: 98.1
Min nTPM: 33.0
P10809_1018
33.0
P10809_1037
50.9
P10809_1056
98.1
P10809_1075
52.8
P10809_1094
47.1
P10809_1106
61.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
111.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 85.7
Samples: 4
Max nTPM: 120.6
Min nTPM: 50.5
RHH5202_R3573
120.6
RHH5230_R3602
80.5
RHH5259_R3631
50.5
RHH5288_R3660
91.0
Effector memory CD8 T-cell nTPM: 79.4
Samples: 4
Max nTPM: 94.0
Min nTPM: 69.8
RHH5203_R3574
94.0
RHH5231_R3603
72.5
RHH5260_R3632
81.2
RHH5289_R3661
69.8
MAIT T-cell nTPM: 77.8
Samples: 4
Max nTPM: 96.4
Min nTPM: 64.9
RHH5233_R3605
96.4
RHH5205_R3576
68.3
RHH5262_R3634
64.9
RHH5297_R3663
81.6
Memory CD4 T-cell TFH nTPM: 79.7
Samples: 4
Max nTPM: 87.1
Min nTPM: 71.7
RHH5300_R3666
71.7
RHH5236_R3608
87.1
RHH5265_R3637
76.2
RHH5208_R3579
83.9
Memory CD4 T-cell Th1 nTPM: 73.2
Samples: 4
Max nTPM: 86.6
Min nTPM: 56.5
RHH5210_R3581
78.3
RHH5302_R3668
86.6
RHH5238_R3610
56.5
RHH5267_R3639
71.4
Memory CD4 T-cell Th1/Th17 nTPM: 82.2
Samples: 4
Max nTPM: 103.6
Min nTPM: 57.0
RHH5303_R3669
103.6
RHH5211_R3582
94.9
RHH5239_R3611
57.0
RHH5268_R3640
73.1
Memory CD4 T-cell Th17 nTPM: 64.9
Samples: 4
Max nTPM: 72.3
Min nTPM: 57.7
RHH5304_R3670
72.3
RHH5212_R3583
69.9
RHH5240_R3612
59.8
RHH5269_R3641
57.7
Memory CD4 T-cell Th2 nTPM: 77.3
Samples: 4
Max nTPM: 92.4
Min nTPM: 60.6
RHH5305_R3671
92.4
RHH5213_R3584
73.8
RHH5241_R3613
82.4
RHH5270_R3642
60.6
Naive CD4 T-cell nTPM: 64.2
Samples: 4
Max nTPM: 76.0
Min nTPM: 45.0
RHH5306_R3672
70.3
RHH5214_R3585
76.0
RHH5242_R3614
65.6
RHH5271_R3643
45.0
Naive CD8 T-cell nTPM: 60.5
Samples: 4
Max nTPM: 76.4
Min nTPM: 49.1
RHH5201_R3572
76.4
RHH5229_R3601
49.1
RHH5258_R3630
66.3
RHH5287_R3659
50.2
Non-Vd2 gdTCR nTPM: 105.3
Samples: 4
Max nTPM: 125.1
Min nTPM: 75.5
RHH5235_R3607
75.5
RHH5264_R3636
125.1
RHH5207_R3578
111.0
RHH5299_R3665
109.5
T-reg nTPM: 74.1
Samples: 4
Max nTPM: 101.7
Min nTPM: 50.1
RHH5301_R3667
82.0
RHH5237_R3609
101.7
RHH5266_R3638
50.1
RHH5209_R3580
62.4
Terminal effector memory CD4 T-cell nTPM: 73.2
Samples: 2
Max nTPM: 97.2
Min nTPM: 49.2
RHH5243_R3615
49.2
RHH5272_R3644
97.2
Terminal effector memory CD8 T-cell nTPM: 111.1
Samples: 4
Max nTPM: 129.8
Min nTPM: 89.5
RHH5232_R3604
120.7
RHH5204_R3575
129.8
RHH5261_R3633
89.5
RHH5296_R3662
104.3
Vd2 gdTCR nTPM: 101.1
Samples: 4
Max nTPM: 138.3
Min nTPM: 68.7
RHH5234_R3606
103.8
RHH5206_R3577
138.3
RHH5263_R3635
68.7
RHH5298_R3664
93.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
