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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
65.6
nTPM
Monaco:
127.9
nTPM
Schmiedel:
200.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
65.6
HPA sample
nTPM
gdT-cell nTPM: 31.7
Samples: 6
Max nTPM: 37.2
Min nTPM: 22.4
P10809_1007
22.4
P10809_1022
32.7
P10809_1041
37.2
P10809_1060
31.1
P10809_1077
31.7
P10809_1098
34.9
MAIT T-cell nTPM: 26.6
Samples: 6
Max nTPM: 31.5
Min nTPM: 20.4
P10809_1006
20.4
P10809_1024
26.7
P10809_1043
25.3
P10809_1062
31.5
P10809_1083
30.1
P10809_1097
25.6
Memory CD4 T-cell nTPM: 38.3
Samples: 6
Max nTPM: 47.0
Min nTPM: 27.0
P10809_1014
30.1
P10809_1026
47.0
P10809_1045
38.6
P10809_1064
27.0
P10809_1086
44.4
P10809_1113
42.9
Memory CD8 T-cell nTPM: 32.0
Samples: 5
Max nTPM: 44.4
Min nTPM: 25.8
P10809_1012
29.8
P10809_1027
28.8
P10809_1046
31.4
P10809_1065
25.8
P10809_1111
44.4
Naive CD4 T-cell nTPM: 65.6
Samples: 6
Max nTPM: 82.8
Min nTPM: 53.1
P10809_1015
53.1
P10809_1030
69.9
P10809_1049
62.7
P10809_1068
82.8
P10809_1085
58.6
P10809_1112
66.7
Naive CD8 T-cell nTPM: 52.4
Samples: 6
Max nTPM: 65.9
Min nTPM: 38.3
P10809_1016
51.2
P10809_1031
62.9
P10809_1050
47.3
P10809_1069
48.8
P10809_1087
38.3
P10809_1110
65.9
T-reg nTPM: 40.4
Samples: 6
Max nTPM: 75.2
Min nTPM: 20.9
P10809_1018
20.9
P10809_1037
33.4
P10809_1056
75.2
P10809_1075
32.2
P10809_1094
45.0
P10809_1106
35.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
127.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 79.1
Samples: 4
Max nTPM: 108.9
Min nTPM: 53.9
RHH5202_R3573
108.9
RHH5230_R3602
58.8
RHH5259_R3631
53.9
RHH5288_R3660
94.7
Effector memory CD8 T-cell nTPM: 29.8
Samples: 4
Max nTPM: 39.2
Min nTPM: 26.0
RHH5203_R3574
39.2
RHH5231_R3603
27.9
RHH5260_R3632
26.0
RHH5289_R3661
26.2
MAIT T-cell nTPM: 49.5
Samples: 4
Max nTPM: 61.1
Min nTPM: 27.4
RHH5233_R3605
49.5
RHH5205_R3576
27.4
RHH5262_R3634
61.1
RHH5297_R3663
59.8
Memory CD4 T-cell TFH nTPM: 101.9
Samples: 4
Max nTPM: 128.0
Min nTPM: 84.3
RHH5300_R3666
84.3
RHH5236_R3608
107.9
RHH5265_R3637
87.4
RHH5208_R3579
128.0
Memory CD4 T-cell Th1 nTPM: 70.1
Samples: 4
Max nTPM: 119.1
Min nTPM: 31.3
RHH5210_R3581
119.1
RHH5302_R3668
78.6
RHH5238_R3610
31.3
RHH5267_R3639
51.5
Memory CD4 T-cell Th1/Th17 nTPM: 63.3
Samples: 4
Max nTPM: 85.5
Min nTPM: 31.4
RHH5303_R3669
84.0
RHH5211_R3582
85.5
RHH5239_R3611
31.4
RHH5268_R3640
52.3
Memory CD4 T-cell Th17 nTPM: 54.5
Samples: 4
Max nTPM: 81.6
Min nTPM: 39.0
RHH5304_R3670
53.0
RHH5212_R3583
81.6
RHH5240_R3612
39.0
RHH5269_R3641
44.4
Memory CD4 T-cell Th2 nTPM: 85.5
Samples: 4
Max nTPM: 122.8
Min nTPM: 66.0
RHH5305_R3671
76.9
RHH5213_R3584
76.3
RHH5241_R3613
122.8
RHH5270_R3642
66.0
Naive CD4 T-cell nTPM: 127.9
Samples: 4
Max nTPM: 159.2
Min nTPM: 101.6
RHH5306_R3672
123.2
RHH5214_R3585
159.2
RHH5242_R3614
127.7
RHH5271_R3643
101.6
Naive CD8 T-cell nTPM: 113.3
Samples: 4
Max nTPM: 167.0
Min nTPM: 45.2
RHH5201_R3572
167.0
RHH5229_R3601
45.2
RHH5258_R3630
136.9
RHH5287_R3659
104.2
Non-Vd2 gdTCR nTPM: 34.8
Samples: 4
Max nTPM: 41.9
Min nTPM: 24.8
RHH5235_R3607
24.8
RHH5264_R3636
36.5
RHH5207_R3578
36.1
RHH5299_R3665
41.9
T-reg nTPM: 88.1
Samples: 4
Max nTPM: 96.5
Min nTPM: 71.5
RHH5301_R3667
96.5
RHH5237_R3609
92.0
RHH5266_R3638
71.5
RHH5209_R3580
92.5
Terminal effector memory CD4 T-cell nTPM: 17.3
Samples: 2
Max nTPM: 32.6
Min nTPM: 2.0
RHH5243_R3615
2.0
RHH5272_R3644
32.6
Terminal effector memory CD8 T-cell nTPM: 32.2
Samples: 4
Max nTPM: 47.0
Min nTPM: 18.1
RHH5232_R3604
29.9
RHH5204_R3575
33.8
RHH5261_R3633
18.1
RHH5296_R3662
47.0
Vd2 gdTCR nTPM: 67.6
Samples: 4
Max nTPM: 87.2
Min nTPM: 45.4
RHH5234_R3606
87.2
RHH5206_R3577
45.4
RHH5263_R3635
58.2
RHH5298_R3664
79.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
