HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:180.3 nTPM
HPA Brain:257.1 nTPM
GTEx:180.3 nTPM
FANTOM5:557.0 Scaled Tags Per Million
Mouse:410.7 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 257.1
Sample id Sample description nTPM
Hippocampus
nTPM: 200.0
1898 Male, age 80, left hemisphere 245.7
1911 Female, age 85, right hemisphere 223.5
2621 Female, age 67, right hemisphere 209.7
2529 Female, age 94, left hemisphere 180.6
1855 Male, age 76, left hemisphere 172.5
2148 Female, age 91, left hemisphere 167.8
Dentate gyrus
nTPM: 186.9
1927 Female, age 91, both hemispheres 209.1
2246 Female, age 85, both hemispheres 187.5
2530 Female, age 94, left hemisphere 185.0
2010 Male, age 76, both hemispheres 184.0
2528 Male, age 74, both hemispheres 178.2
2531 Female, age 67, both hemispheres 177.4
Entorhinal gyrus
nTPM: 213.2
2764 Male, age 80, right hemisphere 258.5
1938 Female, age 85, left hemisphere 251.9
2613 Female, age 94, left hemisphere 214.6
2686 Male, age 75, right hemisphere 204.8
1787 Male, age 76, left hemisphere 194.8
2117 Female, age 91, right hemisphere 154.7
Hippocampus, CA1
nTPM: 257.1
2749 Male, age 80, left hemisphere 449.8
1873 Female, age 85, both hemispheres 248.6
2527 Male, age 74, both hemispheres 210.0
2082 Female, age 91, right hemisphere 204.0
2045 Male, age 76, both hemispheres 173.0
Hippocampus, CA2
nTPM: 208.7
1963 Male, age 80, left hemisphere 283.7
2249 Male, age 74, both hemispheres 230.3
2113 Female, age 91, right hemisphere 201.7
1940 Female, age 85, left hemisphere 192.8
2437 Female, age 94, left hemisphere 175.7
1892 Male, age 76, both hemispheres 167.8
Hippocampus, CA3
nTPM: 241.8
2137 Male, age 80, left hemisphere 354.3
2436 Male, age 74, both hemispheres 300.5
2861 Female, age 67, both hemispheres 222.3
2620 Female, age 94, left hemisphere 194.8
1891 Female, age 85, both hemispheres 191.6
1867 Male, age 76, both hemispheres 187.1
Parahippocampal cortex
nTPM: 218.7
1850 Male, age 80, both hemispheres 263.4
1933 Female, age 85, both hemispheres 259.9
2532 Female, age 72, left hemisphere 231.1
2622 Female, age 67, right hemisphere 218.4
2245 Female, age 91, both hemispheres 218.3
2250 Female, age 67, right hemisphere 214.5
2693 Female, age 94, both hemispheres 211.7
1990 Female, age 91, right hemisphere 211.6
2018 Male, age 76, both hemispheres 187.4
2692 Male, age 74, both hemispheres 170.4
Perirhinal gyrus
nTPM: 249.2
1841 Female, age 85, right hemisphere 302.5
1794 Male, age 80, right hemisphere 282.3
1847 Female, age 91, left hemisphere 261.9
2521 Female, age 94, right hemisphere 218.1
2848 Male, age 76, right hemisphere 181.1
Subiculum
nTPM: 190.1
1901 Male, age 80, both hemispheres 247.7
1977 Female, age 85, both hemispheres 227.8
2619 Male, age 74, both hemispheres 187.7
2042 Male, age 76, both hemispheres 173.2
2438 Female, age 94, left hemisphere 155.6
2729 Female, age 91, right hemisphere 148.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 180.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 180.3
Samples: 197

Max nTPM: 487.0
Min nTPM: 60.9
Std nTPM: 58.3
Median nTPM: 168.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 487.0
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 433.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 416.8
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 336.6
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 332.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 325.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 305.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 288.1
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 286.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 270.5
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 262.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 557.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 557.0
FF:10169-103B7 60 years, female 637.6
FF:10153-102I9 76 years, female 476.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 410.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 410.7
Samples: 4

Max nTPM: 428.8
Min nTPM: 388.8
Sample A Male 388.8
Sample B Male 428.8
Sample C Female 407.7
Sample D Female 417.3
Hippocampal formation
nTPM: 372.2
Samples: 4

Max nTPM: 393.4
Min nTPM: 346.7
Sample A Male 393.4
Sample B Male 346.7
Sample C Female 390.9
Sample D Female 357.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
1052 Antisense, RP_Baylor_103071, Mouse strain C57BL/6J (56 days, male) 12.3
1051 Antisense, RP_Baylor_103071, Mouse strain C57BL/6J (56 days, male) 10.8
1053 Sense, RPS_Baylor_37057, Mouse strain C57BL/6J (56 days, male) 0.0

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