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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
166.4
nTPM
Monaco:
230.4
nTPM
Schmiedel:
164.6
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
166.4
HPA sample
nTPM
gdT-cell nTPM: 54.6
Samples: 6
Max nTPM: 69.1
Min nTPM: 33.1
P10809_1007
33.1
P10809_1022
62.3
P10809_1041
53.0
P10809_1060
62.0
P10809_1077
47.8
P10809_1098
69.1
MAIT T-cell nTPM: 84.4
Samples: 6
Max nTPM: 117.1
Min nTPM: 50.1
P10809_1006
50.1
P10809_1024
57.0
P10809_1043
98.1
P10809_1062
103.0
P10809_1083
80.8
P10809_1097
117.1
Memory CD4 T-cell nTPM: 166.4
Samples: 6
Max nTPM: 228.7
Min nTPM: 118.2
P10809_1014
128.3
P10809_1026
198.6
P10809_1045
181.5
P10809_1064
143.2
P10809_1086
118.2
P10809_1113
228.7
Memory CD8 T-cell nTPM: 96.2
Samples: 5
Max nTPM: 124.6
Min nTPM: 67.4
P10809_1012
94.7
P10809_1027
90.7
P10809_1046
103.5
P10809_1065
67.4
P10809_1111
124.6
Naive CD4 T-cell nTPM: 46.9
Samples: 6
Max nTPM: 66.3
Min nTPM: 26.5
P10809_1015
26.5
P10809_1030
40.5
P10809_1049
48.5
P10809_1068
40.5
P10809_1085
58.9
P10809_1112
66.3
Naive CD8 T-cell nTPM: 38.6
Samples: 6
Max nTPM: 44.1
Min nTPM: 18.4
P10809_1016
18.4
P10809_1031
43.0
P10809_1050
43.3
P10809_1069
44.1
P10809_1087
44.1
P10809_1110
38.6
T-reg nTPM: 82.3
Samples: 6
Max nTPM: 118.2
Min nTPM: 62.0
P10809_1018
77.1
P10809_1037
68.6
P10809_1056
118.2
P10809_1075
83.2
P10809_1094
62.0
P10809_1106
84.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
230.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 137.8
Samples: 4
Max nTPM: 204.5
Min nTPM: 72.7
RHH5202_R3573
72.7
RHH5230_R3602
204.5
RHH5259_R3631
115.0
RHH5288_R3660
158.9
Effector memory CD8 T-cell nTPM: 105.3
Samples: 4
Max nTPM: 122.7
Min nTPM: 86.1
RHH5203_R3574
86.1
RHH5231_R3603
112.1
RHH5260_R3632
100.3
RHH5289_R3661
122.7
MAIT T-cell nTPM: 96.2
Samples: 4
Max nTPM: 110.3
Min nTPM: 82.4
RHH5233_R3605
82.4
RHH5205_R3576
84.5
RHH5262_R3634
107.6
RHH5297_R3663
110.3
Memory CD4 T-cell TFH nTPM: 201.6
Samples: 4
Max nTPM: 270.7
Min nTPM: 34.6
RHH5300_R3666
233.4
RHH5236_R3608
270.7
RHH5265_R3637
267.7
RHH5208_R3579
34.6
Memory CD4 T-cell Th1 nTPM: 143.2
Samples: 4
Max nTPM: 169.6
Min nTPM: 111.9
RHH5210_R3581
111.9
RHH5302_R3668
169.6
RHH5238_R3610
133.9
RHH5267_R3639
157.4
Memory CD4 T-cell Th1/Th17 nTPM: 181.8
Samples: 4
Max nTPM: 239.4
Min nTPM: 113.3
RHH5303_R3669
199.0
RHH5211_R3582
239.4
RHH5239_R3611
113.3
RHH5268_R3640
175.6
Memory CD4 T-cell Th17 nTPM: 188.8
Samples: 4
Max nTPM: 243.4
Min nTPM: 115.4
RHH5304_R3670
222.0
RHH5212_R3583
243.4
RHH5240_R3612
115.4
RHH5269_R3641
174.2
Memory CD4 T-cell Th2 nTPM: 230.4
Samples: 4
Max nTPM: 258.2
Min nTPM: 208.5
RHH5305_R3671
226.3
RHH5213_R3584
228.7
RHH5241_R3613
208.5
RHH5270_R3642
258.2
Naive CD4 T-cell nTPM: 64.7
Samples: 4
Max nTPM: 67.7
Min nTPM: 61.5
RHH5306_R3672
61.5
RHH5214_R3585
67.7
RHH5242_R3614
64.1
RHH5271_R3643
65.4
Naive CD8 T-cell nTPM: 28.3
Samples: 4
Max nTPM: 51.9
Min nTPM: 3.0
RHH5201_R3572
3.0
RHH5229_R3601
28.2
RHH5258_R3630
51.9
RHH5287_R3659
30.2
Non-Vd2 gdTCR nTPM: 64.8
Samples: 4
Max nTPM: 77.9
Min nTPM: 55.7
RHH5235_R3607
62.3
RHH5264_R3636
77.9
RHH5207_R3578
63.3
RHH5299_R3665
55.7
T-reg nTPM: 112.1
Samples: 4
Max nTPM: 131.9
Min nTPM: 93.2
RHH5301_R3667
112.3
RHH5237_R3609
131.9
RHH5266_R3638
110.8
RHH5209_R3580
93.2
Terminal effector memory CD4 T-cell nTPM: 81.1
Samples: 2
Max nTPM: 92.5
Min nTPM: 69.6
RHH5243_R3615
69.6
RHH5272_R3644
92.5
Terminal effector memory CD8 T-cell nTPM: 63.1
Samples: 4
Max nTPM: 80.9
Min nTPM: 50.6
RHH5232_R3604
50.6
RHH5204_R3575
58.1
RHH5261_R3633
62.7
RHH5296_R3662
80.9
Vd2 gdTCR nTPM: 76.3
Samples: 4
Max nTPM: 93.7
Min nTPM: 62.8
RHH5234_R3606
93.7
RHH5206_R3577
62.8
RHH5263_R3635
73.3
RHH5298_R3664
75.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
