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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
143.9
nTPM
Monaco:
95.6
nTPM
Schmiedel:
79.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
143.9
HPA sample
nTPM
gdT-cell nTPM: 121.8
Samples: 6
Max nTPM: 149.0
Min nTPM: 91.9
P10809_1007
123.6
P10809_1022
111.2
P10809_1041
149.0
P10809_1060
91.9
P10809_1077
134.4
P10809_1098
120.6
MAIT T-cell nTPM: 138.9
Samples: 6
Max nTPM: 173.4
Min nTPM: 99.3
P10809_1006
123.4
P10809_1024
141.4
P10809_1043
168.3
P10809_1062
99.3
P10809_1083
127.4
P10809_1097
173.4
Memory CD4 T-cell nTPM: 125.8
Samples: 6
Max nTPM: 161.2
Min nTPM: 79.4
P10809_1014
161.2
P10809_1026
110.0
P10809_1045
145.9
P10809_1064
79.4
P10809_1086
125.2
P10809_1113
133.0
Memory CD8 T-cell nTPM: 119.7
Samples: 5
Max nTPM: 146.1
Min nTPM: 93.2
P10809_1012
104.0
P10809_1027
146.1
P10809_1046
131.8
P10809_1065
93.2
P10809_1111
123.2
Naive CD4 T-cell nTPM: 93.0
Samples: 6
Max nTPM: 117.2
Min nTPM: 68.6
P10809_1015
117.2
P10809_1030
92.8
P10809_1049
68.6
P10809_1068
72.8
P10809_1085
103.4
P10809_1112
103.3
Naive CD8 T-cell nTPM: 107.1
Samples: 6
Max nTPM: 128.9
Min nTPM: 90.3
P10809_1016
128.9
P10809_1031
95.3
P10809_1050
110.4
P10809_1069
90.3
P10809_1087
117.6
P10809_1110
100.3
T-reg nTPM: 143.9
Samples: 6
Max nTPM: 170.5
Min nTPM: 87.0
P10809_1018
155.3
P10809_1037
145.4
P10809_1056
153.0
P10809_1075
87.0
P10809_1094
152.4
P10809_1106
170.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
95.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 59.2
Samples: 4
Max nTPM: 91.7
Min nTPM: 36.8
RHH5202_R3573
62.5
RHH5230_R3602
36.8
RHH5259_R3631
45.9
RHH5288_R3660
91.7
Effector memory CD8 T-cell nTPM: 61.7
Samples: 4
Max nTPM: 73.6
Min nTPM: 56.1
RHH5203_R3574
60.7
RHH5231_R3603
73.6
RHH5260_R3632
56.1
RHH5289_R3661
56.4
MAIT T-cell nTPM: 79.6
Samples: 4
Max nTPM: 96.6
Min nTPM: 64.3
RHH5233_R3605
96.6
RHH5205_R3576
64.3
RHH5262_R3634
68.3
RHH5297_R3663
89.3
Memory CD4 T-cell TFH nTPM: 85.8
Samples: 4
Max nTPM: 129.8
Min nTPM: 53.4
RHH5300_R3666
77.5
RHH5236_R3608
129.8
RHH5265_R3637
53.4
RHH5208_R3579
82.6
Memory CD4 T-cell Th1 nTPM: 80.6
Samples: 4
Max nTPM: 122.7
Min nTPM: 51.3
RHH5210_R3581
77.2
RHH5302_R3668
122.7
RHH5238_R3610
71.0
RHH5267_R3639
51.3
Memory CD4 T-cell Th1/Th17 nTPM: 85.3
Samples: 4
Max nTPM: 132.0
Min nTPM: 47.6
RHH5303_R3669
132.0
RHH5211_R3582
93.0
RHH5239_R3611
47.6
RHH5268_R3640
68.6
Memory CD4 T-cell Th17 nTPM: 62.6
Samples: 4
Max nTPM: 70.2
Min nTPM: 51.3
RHH5304_R3670
70.2
RHH5212_R3583
65.9
RHH5240_R3612
63.1
RHH5269_R3641
51.3
Memory CD4 T-cell Th2 nTPM: 68.3
Samples: 4
Max nTPM: 88.8
Min nTPM: 53.6
RHH5305_R3671
74.8
RHH5213_R3584
56.0
RHH5241_R3613
88.8
RHH5270_R3642
53.6
Naive CD4 T-cell nTPM: 65.0
Samples: 4
Max nTPM: 96.6
Min nTPM: 42.0
RHH5306_R3672
74.7
RHH5214_R3585
96.6
RHH5242_R3614
42.0
RHH5271_R3643
46.5
Naive CD8 T-cell nTPM: 52.9
Samples: 4
Max nTPM: 75.2
Min nTPM: 24.1
RHH5201_R3572
57.5
RHH5229_R3601
24.1
RHH5258_R3630
75.2
RHH5287_R3659
54.8
Non-Vd2 gdTCR nTPM: 77.6
Samples: 4
Max nTPM: 121.5
Min nTPM: 48.0
RHH5235_R3607
49.7
RHH5264_R3636
91.0
RHH5207_R3578
48.0
RHH5299_R3665
121.5
T-reg nTPM: 79.4
Samples: 4
Max nTPM: 103.3
Min nTPM: 40.5
RHH5301_R3667
103.3
RHH5237_R3609
97.8
RHH5266_R3638
40.5
RHH5209_R3580
75.8
Terminal effector memory CD4 T-cell nTPM: 62.9
Samples: 2
Max nTPM: 84.2
Min nTPM: 41.5
RHH5243_R3615
41.5
RHH5272_R3644
84.2
Terminal effector memory CD8 T-cell nTPM: 95.6
Samples: 4
Max nTPM: 159.1
Min nTPM: 61.2
RHH5232_R3604
69.9
RHH5204_R3575
159.1
RHH5261_R3633
61.2
RHH5296_R3662
92.1
Vd2 gdTCR nTPM: 85.7
Samples: 4
Max nTPM: 120.1
Min nTPM: 49.8
RHH5234_R3606
54.3
RHH5206_R3577
118.6
RHH5263_R3635
49.8
RHH5298_R3664
120.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
