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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
12.9
nTPM
Monaco:
22.4
nTPM
Schmiedel:
31.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
12.9
HPA sample
nTPM
gdT-cell nTPM: 9.4
Samples: 6
Max nTPM: 13.0
Min nTPM: 5.3
P10809_1007
5.3
P10809_1022
10.1
P10809_1041
13.0
P10809_1060
9.8
P10809_1077
8.4
P10809_1098
9.6
MAIT T-cell nTPM: 12.9
Samples: 6
Max nTPM: 19.1
Min nTPM: 6.5
P10809_1006
6.5
P10809_1024
14.6
P10809_1043
19.1
P10809_1062
11.9
P10809_1083
13.5
P10809_1097
11.8
Memory CD4 T-cell nTPM: 8.5
Samples: 6
Max nTPM: 13.5
Min nTPM: 5.0
P10809_1014
5.8
P10809_1026
5.0
P10809_1045
9.6
P10809_1064
13.5
P10809_1086
9.8
P10809_1113
7.1
Memory CD8 T-cell nTPM: 9.2
Samples: 5
Max nTPM: 16.3
Min nTPM: 3.6
P10809_1012
3.6
P10809_1027
7.8
P10809_1046
16.3
P10809_1065
12.6
P10809_1111
5.9
Naive CD4 T-cell nTPM: 11.8
Samples: 6
Max nTPM: 19.7
Min nTPM: 6.6
P10809_1015
6.6
P10809_1030
11.3
P10809_1049
19.7
P10809_1068
11.8
P10809_1085
8.4
P10809_1112
12.8
Naive CD8 T-cell nTPM: 12.6
Samples: 6
Max nTPM: 18.8
Min nTPM: 7.8
P10809_1016
7.8
P10809_1031
12.9
P10809_1050
18.8
P10809_1069
14.2
P10809_1087
7.8
P10809_1110
14.2
T-reg nTPM: 8.0
Samples: 6
Max nTPM: 18.2
Min nTPM: 3.4
P10809_1018
3.4
P10809_1037
5.5
P10809_1056
18.2
P10809_1075
9.4
P10809_1094
7.3
P10809_1106
4.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
22.4
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 10.5
Samples: 4
Max nTPM: 17.8
Min nTPM: 5.9
RHH5202_R3573
17.8
RHH5230_R3602
9.9
RHH5259_R3631
5.9
RHH5288_R3660
8.2
Effector memory CD8 T-cell nTPM: 11.2
Samples: 4
Max nTPM: 13.0
Min nTPM: 8.7
RHH5203_R3574
13.0
RHH5231_R3603
8.7
RHH5260_R3632
11.7
RHH5289_R3661
11.3
MAIT T-cell nTPM: 15.0
Samples: 4
Max nTPM: 22.5
Min nTPM: 7.0
RHH5233_R3605
17.3
RHH5205_R3576
22.5
RHH5262_R3634
7.0
RHH5297_R3663
13.2
Memory CD4 T-cell TFH nTPM: 10.9
Samples: 4
Max nTPM: 14.2
Min nTPM: 8.5
RHH5300_R3666
11.2
RHH5236_R3608
14.2
RHH5265_R3637
8.5
RHH5208_R3579
9.7
Memory CD4 T-cell Th1 nTPM: 10.2
Samples: 4
Max nTPM: 12.7
Min nTPM: 8.4
RHH5210_R3581
10.8
RHH5302_R3668
12.7
RHH5238_R3610
8.4
RHH5267_R3639
8.8
Memory CD4 T-cell Th1/Th17 nTPM: 11.4
Samples: 4
Max nTPM: 16.2
Min nTPM: 6.6
RHH5303_R3669
13.1
RHH5211_R3582
16.2
RHH5239_R3611
9.7
RHH5268_R3640
6.6
Memory CD4 T-cell Th17 nTPM: 10.1
Samples: 4
Max nTPM: 15.2
Min nTPM: 5.0
RHH5304_R3670
10.1
RHH5212_R3583
15.2
RHH5240_R3612
10.0
RHH5269_R3641
5.0
Memory CD4 T-cell Th2 nTPM: 14.9
Samples: 4
Max nTPM: 22.7
Min nTPM: 7.2
RHH5305_R3671
7.2
RHH5213_R3584
15.0
RHH5241_R3613
14.6
RHH5270_R3642
22.7
Naive CD4 T-cell nTPM: 16.5
Samples: 4
Max nTPM: 23.3
Min nTPM: 9.0
RHH5306_R3672
9.0
RHH5214_R3585
12.4
RHH5242_R3614
21.2
RHH5271_R3643
23.3
Naive CD8 T-cell nTPM: 22.4
Samples: 4
Max nTPM: 27.1
Min nTPM: 17.3
RHH5201_R3572
24.9
RHH5229_R3601
17.3
RHH5258_R3630
20.2
RHH5287_R3659
27.1
Non-Vd2 gdTCR nTPM: 7.7
Samples: 4
Max nTPM: 11.8
Min nTPM: 4.9
RHH5235_R3607
7.5
RHH5264_R3636
4.9
RHH5207_R3578
11.8
RHH5299_R3665
6.7
T-reg nTPM: 9.0
Samples: 4
Max nTPM: 11.1
Min nTPM: 6.8
RHH5301_R3667
9.5
RHH5237_R3609
11.1
RHH5266_R3638
8.5
RHH5209_R3580
6.8
Terminal effector memory CD4 T-cell nTPM: 5.8
Samples: 2
Max nTPM: 5.9
Min nTPM: 5.7
RHH5243_R3615
5.9
RHH5272_R3644
5.7
Terminal effector memory CD8 T-cell nTPM: 9.8
Samples: 4
Max nTPM: 12.6
Min nTPM: 8.0
RHH5232_R3604
8.6
RHH5204_R3575
10.1
RHH5261_R3633
8.0
RHH5296_R3662
12.6
Vd2 gdTCR nTPM: 14.2
Samples: 4
Max nTPM: 17.5
Min nTPM: 6.0
RHH5234_R3606
17.5
RHH5206_R3577
6.0
RHH5263_R3635
16.6
RHH5298_R3664
16.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
