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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
60.6
nTPM
Monaco:
64.3
nTPM
Schmiedel:
91.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
60.6
HPA sample
nTPM
gdT-cell nTPM: 44.6
Samples: 6
Max nTPM: 84.8
Min nTPM: 19.0
P10809_1007
19.0
P10809_1022
37.4
P10809_1041
29.2
P10809_1060
62.7
P10809_1077
84.8
P10809_1098
34.7
MAIT T-cell nTPM: 49.3
Samples: 6
Max nTPM: 76.6
Min nTPM: 25.8
P10809_1006
25.8
P10809_1024
55.1
P10809_1043
36.9
P10809_1062
67.8
P10809_1083
76.6
P10809_1097
33.5
Memory CD4 T-cell nTPM: 50.7
Samples: 6
Max nTPM: 95.4
Min nTPM: 25.6
P10809_1014
25.6
P10809_1026
38.7
P10809_1045
47.4
P10809_1064
69.0
P10809_1086
95.4
P10809_1113
28.0
Memory CD8 T-cell nTPM: 42.8
Samples: 5
Max nTPM: 76.7
Min nTPM: 21.5
P10809_1012
21.5
P10809_1027
38.2
P10809_1046
40.9
P10809_1065
76.7
P10809_1111
36.8
Naive CD4 T-cell nTPM: 60.6
Samples: 6
Max nTPM: 110.5
Min nTPM: 21.1
P10809_1015
21.1
P10809_1030
41.5
P10809_1049
64.8
P10809_1068
90.9
P10809_1085
110.5
P10809_1112
34.9
Naive CD8 T-cell nTPM: 57.5
Samples: 6
Max nTPM: 97.7
Min nTPM: 20.4
P10809_1016
20.4
P10809_1031
55.1
P10809_1050
48.0
P10809_1069
97.7
P10809_1087
84.0
P10809_1110
40.0
T-reg nTPM: 55.1
Samples: 6
Max nTPM: 108.5
Min nTPM: 23.4
P10809_1018
23.4
P10809_1037
57.5
P10809_1056
33.9
P10809_1075
76.1
P10809_1094
108.5
P10809_1106
30.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
64.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 54.1
Samples: 4
Max nTPM: 61.8
Min nTPM: 32.0
RHH5202_R3573
60.6
RHH5230_R3602
61.8
RHH5259_R3631
32.0
RHH5288_R3660
61.8
Effector memory CD8 T-cell nTPM: 55.8
Samples: 4
Max nTPM: 71.0
Min nTPM: 38.1
RHH5203_R3574
67.3
RHH5231_R3603
71.0
RHH5260_R3632
46.6
RHH5289_R3661
38.1
MAIT T-cell nTPM: 49.0
Samples: 4
Max nTPM: 51.7
Min nTPM: 43.9
RHH5233_R3605
50.5
RHH5205_R3576
51.7
RHH5262_R3634
43.9
RHH5297_R3663
49.8
Memory CD4 T-cell TFH nTPM: 50.8
Samples: 4
Max nTPM: 56.6
Min nTPM: 46.1
RHH5300_R3666
53.2
RHH5236_R3608
56.6
RHH5265_R3637
46.1
RHH5208_R3579
47.3
Memory CD4 T-cell Th1 nTPM: 38.5
Samples: 4
Max nTPM: 45.9
Min nTPM: 34.5
RHH5210_R3581
45.9
RHH5302_R3668
38.6
RHH5238_R3610
34.5
RHH5267_R3639
34.9
Memory CD4 T-cell Th1/Th17 nTPM: 47.5
Samples: 4
Max nTPM: 58.8
Min nTPM: 29.0
RHH5303_R3669
54.5
RHH5211_R3582
58.8
RHH5239_R3611
29.0
RHH5268_R3640
47.6
Memory CD4 T-cell Th17 nTPM: 52.4
Samples: 4
Max nTPM: 65.2
Min nTPM: 39.5
RHH5304_R3670
53.9
RHH5212_R3583
65.2
RHH5240_R3612
50.8
RHH5269_R3641
39.5
Memory CD4 T-cell Th2 nTPM: 55.9
Samples: 4
Max nTPM: 70.1
Min nTPM: 42.5
RHH5305_R3671
51.7
RHH5213_R3584
70.1
RHH5241_R3613
42.5
RHH5270_R3642
59.3
Naive CD4 T-cell nTPM: 54.4
Samples: 4
Max nTPM: 58.9
Min nTPM: 50.1
RHH5306_R3672
54.4
RHH5214_R3585
54.3
RHH5242_R3614
58.9
RHH5271_R3643
50.1
Naive CD8 T-cell nTPM: 60.1
Samples: 4
Max nTPM: 73.4
Min nTPM: 34.9
RHH5201_R3572
68.3
RHH5229_R3601
34.9
RHH5258_R3630
73.4
RHH5287_R3659
63.9
Non-Vd2 gdTCR nTPM: 51.0
Samples: 4
Max nTPM: 57.9
Min nTPM: 41.5
RHH5235_R3607
49.0
RHH5264_R3636
55.7
RHH5207_R3578
57.9
RHH5299_R3665
41.5
T-reg nTPM: 45.2
Samples: 4
Max nTPM: 62.6
Min nTPM: 37.4
RHH5301_R3667
40.5
RHH5237_R3609
62.6
RHH5266_R3638
40.2
RHH5209_R3580
37.4
Terminal effector memory CD4 T-cell nTPM: 52.0
Samples: 2
Max nTPM: 52.3
Min nTPM: 51.7
RHH5243_R3615
51.7
RHH5272_R3644
52.3
Terminal effector memory CD8 T-cell nTPM: 55.1
Samples: 4
Max nTPM: 57.5
Min nTPM: 53.4
RHH5232_R3604
54.6
RHH5204_R3575
54.8
RHH5261_R3633
53.4
RHH5296_R3662
57.5
Vd2 gdTCR nTPM: 64.3
Samples: 4
Max nTPM: 76.4
Min nTPM: 47.9
RHH5234_R3606
76.4
RHH5206_R3577
63.6
RHH5263_R3635
69.3
RHH5298_R3664
47.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
