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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.1
nTPM
Monaco:
150.3
nTPM
Schmiedel:
29.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.1
HPA sample
nTPM
gdT-cell nTPM: 55.1
Samples: 6
Max nTPM: 78.9
Min nTPM: 42.3
P10809_1007
43.5
P10809_1022
64.5
P10809_1041
78.9
P10809_1060
50.7
P10809_1077
50.9
P10809_1098
42.3
MAIT T-cell nTPM: 35.6
Samples: 6
Max nTPM: 48.4
Min nTPM: 31.6
P10809_1006
32.1
P10809_1024
37.3
P10809_1043
48.4
P10809_1062
32.3
P10809_1083
31.6
P10809_1097
32.0
Memory CD4 T-cell nTPM: 31.4
Samples: 6
Max nTPM: 38.4
Min nTPM: 24.5
P10809_1014
25.0
P10809_1026
35.5
P10809_1045
29.9
P10809_1064
38.4
P10809_1086
34.8
P10809_1113
24.5
Memory CD8 T-cell nTPM: 42.7
Samples: 5
Max nTPM: 47.8
Min nTPM: 38.1
P10809_1012
44.8
P10809_1027
47.8
P10809_1046
43.3
P10809_1065
38.1
P10809_1111
39.3
Naive CD4 T-cell nTPM: 19.5
Samples: 6
Max nTPM: 27.2
Min nTPM: 11.8
P10809_1015
17.0
P10809_1030
21.2
P10809_1049
11.8
P10809_1068
20.3
P10809_1085
27.2
P10809_1112
19.4
Naive CD8 T-cell nTPM: 35.0
Samples: 6
Max nTPM: 49.4
Min nTPM: 20.2
P10809_1016
22.4
P10809_1031
49.4
P10809_1050
37.2
P10809_1069
37.2
P10809_1087
43.3
P10809_1110
20.2
T-reg nTPM: 41.4
Samples: 6
Max nTPM: 63.1
Min nTPM: 19.7
P10809_1018
41.1
P10809_1037
42.3
P10809_1056
41.6
P10809_1075
19.7
P10809_1094
63.1
P10809_1106
40.3
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
150.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 73.7
Samples: 4
Max nTPM: 84.1
Min nTPM: 62.4
RHH5202_R3573
84.1
RHH5230_R3602
62.4
RHH5259_R3631
83.2
RHH5288_R3660
65.1
Effector memory CD8 T-cell nTPM: 130.6
Samples: 4
Max nTPM: 147.1
Min nTPM: 119.1
RHH5203_R3574
147.1
RHH5231_R3603
126.3
RHH5260_R3632
129.9
RHH5289_R3661
119.1
MAIT T-cell nTPM: 92.3
Samples: 4
Max nTPM: 109.4
Min nTPM: 75.0
RHH5233_R3605
103.8
RHH5205_R3576
109.4
RHH5262_R3634
75.0
RHH5297_R3663
80.8
Memory CD4 T-cell TFH nTPM: 64.1
Samples: 4
Max nTPM: 73.7
Min nTPM: 54.5
RHH5300_R3666
54.5
RHH5236_R3608
72.9
RHH5265_R3637
55.1
RHH5208_R3579
73.7
Memory CD4 T-cell Th1 nTPM: 65.7
Samples: 4
Max nTPM: 69.5
Min nTPM: 59.4
RHH5210_R3581
66.2
RHH5302_R3668
67.8
RHH5238_R3610
59.4
RHH5267_R3639
69.5
Memory CD4 T-cell Th1/Th17 nTPM: 76.7
Samples: 4
Max nTPM: 95.7
Min nTPM: 67.1
RHH5303_R3669
70.0
RHH5211_R3582
95.7
RHH5239_R3611
73.8
RHH5268_R3640
67.1
Memory CD4 T-cell Th17 nTPM: 85.4
Samples: 4
Max nTPM: 95.7
Min nTPM: 72.2
RHH5304_R3670
82.2
RHH5212_R3583
95.7
RHH5240_R3612
91.5
RHH5269_R3641
72.2
Memory CD4 T-cell Th2 nTPM: 80.2
Samples: 4
Max nTPM: 93.9
Min nTPM: 59.4
RHH5305_R3671
81.5
RHH5213_R3584
93.9
RHH5241_R3613
85.8
RHH5270_R3642
59.4
Naive CD4 T-cell nTPM: 38.3
Samples: 4
Max nTPM: 47.9
Min nTPM: 28.2
RHH5306_R3672
36.8
RHH5214_R3585
40.3
RHH5242_R3614
47.9
RHH5271_R3643
28.2
Naive CD8 T-cell nTPM: 50.2
Samples: 4
Max nTPM: 60.4
Min nTPM: 37.7
RHH5201_R3572
60.4
RHH5229_R3601
37.7
RHH5258_R3630
42.4
RHH5287_R3659
60.2
Non-Vd2 gdTCR nTPM: 146.6
Samples: 4
Max nTPM: 166.4
Min nTPM: 136.4
RHH5235_R3607
136.4
RHH5264_R3636
166.4
RHH5207_R3578
138.0
RHH5299_R3665
145.6
T-reg nTPM: 65.8
Samples: 4
Max nTPM: 71.9
Min nTPM: 59.9
RHH5301_R3667
59.9
RHH5237_R3609
70.8
RHH5266_R3638
60.4
RHH5209_R3580
71.9
Terminal effector memory CD4 T-cell nTPM: 117.3
Samples: 2
Max nTPM: 156.5
Min nTPM: 78.1
RHH5243_R3615
156.5
RHH5272_R3644
78.1
Terminal effector memory CD8 T-cell nTPM: 150.3
Samples: 4
Max nTPM: 173.8
Min nTPM: 131.2
RHH5232_R3604
173.8
RHH5204_R3575
131.2
RHH5261_R3633
136.1
RHH5296_R3662
160.2
Vd2 gdTCR nTPM: 119.2
Samples: 4
Max nTPM: 154.2
Min nTPM: 86.0
RHH5234_R3606
110.7
RHH5206_R3577
154.2
RHH5263_R3635
126.0
RHH5298_R3664
86.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
