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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
77.1
nTPM
Monaco:
124.2
nTPM
Schmiedel:
38.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
77.1
HPA sample
nTPM
gdT-cell nTPM: 58.9
Samples: 6
Max nTPM: 69.6
Min nTPM: 43.3
P10809_1007
55.8
P10809_1022
69.6
P10809_1041
58.1
P10809_1060
43.3
P10809_1077
56.7
P10809_1098
69.6
MAIT T-cell nTPM: 45.1
Samples: 6
Max nTPM: 53.5
Min nTPM: 35.0
P10809_1006
41.8
P10809_1024
53.5
P10809_1043
37.8
P10809_1062
35.0
P10809_1083
53.0
P10809_1097
49.6
Memory CD4 T-cell nTPM: 41.2
Samples: 6
Max nTPM: 48.0
Min nTPM: 36.4
P10809_1014
36.4
P10809_1026
38.0
P10809_1045
37.6
P10809_1064
40.5
P10809_1086
46.6
P10809_1113
48.0
Memory CD8 T-cell nTPM: 45.0
Samples: 5
Max nTPM: 57.1
Min nTPM: 36.8
P10809_1012
40.9
P10809_1027
45.0
P10809_1046
36.8
P10809_1065
45.0
P10809_1111
57.1
Naive CD4 T-cell nTPM: 35.7
Samples: 6
Max nTPM: 41.6
Min nTPM: 30.6
P10809_1015
30.6
P10809_1030
35.8
P10809_1049
31.2
P10809_1068
39.7
P10809_1085
41.6
P10809_1112
35.2
Naive CD8 T-cell nTPM: 43.5
Samples: 6
Max nTPM: 54.4
Min nTPM: 30.7
P10809_1016
30.7
P10809_1031
54.4
P10809_1050
38.4
P10809_1069
43.4
P10809_1087
54.1
P10809_1110
40.2
T-reg nTPM: 77.1
Samples: 6
Max nTPM: 108.9
Min nTPM: 60.8
P10809_1018
68.0
P10809_1037
67.7
P10809_1056
108.9
P10809_1075
60.8
P10809_1094
70.5
P10809_1106
86.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
124.2
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 72.0
Samples: 4
Max nTPM: 98.9
Min nTPM: 52.6
RHH5202_R3573
98.9
RHH5230_R3602
61.1
RHH5259_R3631
52.6
RHH5288_R3660
75.4
Effector memory CD8 T-cell nTPM: 100.5
Samples: 4
Max nTPM: 109.5
Min nTPM: 79.3
RHH5203_R3574
109.5
RHH5231_R3603
103.9
RHH5260_R3632
79.3
RHH5289_R3661
109.2
MAIT T-cell nTPM: 85.9
Samples: 4
Max nTPM: 96.0
Min nTPM: 72.1
RHH5233_R3605
83.0
RHH5205_R3576
96.0
RHH5262_R3634
72.1
RHH5297_R3663
92.5
Memory CD4 T-cell TFH nTPM: 77.2
Samples: 4
Max nTPM: 109.5
Min nTPM: 49.3
RHH5300_R3666
91.9
RHH5236_R3608
109.5
RHH5265_R3637
49.3
RHH5208_R3579
58.2
Memory CD4 T-cell Th1 nTPM: 78.3
Samples: 4
Max nTPM: 83.2
Min nTPM: 67.9
RHH5210_R3581
81.0
RHH5302_R3668
83.2
RHH5238_R3610
67.9
RHH5267_R3639
80.9
Memory CD4 T-cell Th1/Th17 nTPM: 68.4
Samples: 4
Max nTPM: 91.4
Min nTPM: 40.9
RHH5303_R3669
91.3
RHH5211_R3582
91.4
RHH5239_R3611
40.9
RHH5268_R3640
50.0
Memory CD4 T-cell Th17 nTPM: 81.0
Samples: 4
Max nTPM: 98.0
Min nTPM: 63.7
RHH5304_R3670
91.9
RHH5212_R3583
70.4
RHH5240_R3612
98.0
RHH5269_R3641
63.7
Memory CD4 T-cell Th2 nTPM: 97.2
Samples: 4
Max nTPM: 105.3
Min nTPM: 86.5
RHH5305_R3671
86.5
RHH5213_R3584
105.3
RHH5241_R3613
100.4
RHH5270_R3642
96.7
Naive CD4 T-cell nTPM: 54.7
Samples: 4
Max nTPM: 69.4
Min nTPM: 34.5
RHH5306_R3672
61.9
RHH5214_R3585
53.1
RHH5242_R3614
34.5
RHH5271_R3643
69.4
Naive CD8 T-cell nTPM: 44.3
Samples: 4
Max nTPM: 59.2
Min nTPM: 28.9
RHH5201_R3572
53.0
RHH5229_R3601
28.9
RHH5258_R3630
59.2
RHH5287_R3659
36.0
Non-Vd2 gdTCR nTPM: 124.2
Samples: 4
Max nTPM: 151.5
Min nTPM: 96.6
RHH5235_R3607
96.6
RHH5264_R3636
146.3
RHH5207_R3578
151.5
RHH5299_R3665
102.3
T-reg nTPM: 89.3
Samples: 4
Max nTPM: 113.3
Min nTPM: 75.3
RHH5301_R3667
79.5
RHH5237_R3609
113.3
RHH5266_R3638
89.2
RHH5209_R3580
75.3
Terminal effector memory CD4 T-cell nTPM: 83.0
Samples: 2
Max nTPM: 90.4
Min nTPM: 75.6
RHH5243_R3615
90.4
RHH5272_R3644
75.6
Terminal effector memory CD8 T-cell nTPM: 91.9
Samples: 4
Max nTPM: 111.6
Min nTPM: 73.6
RHH5232_R3604
98.7
RHH5204_R3575
111.6
RHH5261_R3633
73.6
RHH5296_R3662
83.6
Vd2 gdTCR nTPM: 97.1
Samples: 4
Max nTPM: 132.3
Min nTPM: 72.5
RHH5234_R3606
74.9
RHH5206_R3577
132.3
RHH5263_R3635
108.7
RHH5298_R3664
72.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
