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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
55.6
nTPM
Monaco:
28.5
nTPM
Schmiedel:
51.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
55.6
HPA sample
nTPM
gdT-cell nTPM: 40.7
Samples: 6
Max nTPM: 61.7
Min nTPM: 24.2
P10809_1007
35.1
P10809_1022
61.7
P10809_1041
24.2
P10809_1060
29.2
P10809_1077
35.1
P10809_1098
58.8
MAIT T-cell nTPM: 41.3
Samples: 6
Max nTPM: 72.2
Min nTPM: 26.7
P10809_1006
35.2
P10809_1024
37.3
P10809_1043
26.7
P10809_1062
37.3
P10809_1083
39.1
P10809_1097
72.2
Memory CD4 T-cell nTPM: 55.7
Samples: 6
Max nTPM: 77.3
Min nTPM: 36.1
P10809_1014
42.0
P10809_1026
74.4
P10809_1045
36.1
P10809_1064
55.7
P10809_1086
48.4
P10809_1113
77.3
Memory CD8 T-cell nTPM: 39.1
Samples: 5
Max nTPM: 53.4
Min nTPM: 33.1
P10809_1012
38.4
P10809_1027
35.8
P10809_1046
33.1
P10809_1065
34.8
P10809_1111
53.4
Naive CD4 T-cell nTPM: 47.2
Samples: 6
Max nTPM: 59.4
Min nTPM: 37.0
P10809_1015
37.0
P10809_1030
57.0
P10809_1049
42.2
P10809_1068
37.3
P10809_1085
50.0
P10809_1112
59.4
Naive CD8 T-cell nTPM: 39.1
Samples: 6
Max nTPM: 66.2
Min nTPM: 27.8
P10809_1016
36.5
P10809_1031
36.8
P10809_1050
29.8
P10809_1069
27.8
P10809_1087
37.5
P10809_1110
66.2
T-reg nTPM: 54.1
Samples: 6
Max nTPM: 66.4
Min nTPM: 32.1
P10809_1018
50.4
P10809_1037
51.5
P10809_1056
32.1
P10809_1075
62.3
P10809_1094
62.1
P10809_1106
66.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
28.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 17.5
Samples: 4
Max nTPM: 24.2
Min nTPM: 12.3
RHH5202_R3573
14.2
RHH5230_R3602
12.3
RHH5259_R3631
19.4
RHH5288_R3660
24.2
Effector memory CD8 T-cell nTPM: 11.1
Samples: 4
Max nTPM: 15.6
Min nTPM: 8.3
RHH5203_R3574
11.3
RHH5231_R3603
8.3
RHH5260_R3632
15.6
RHH5289_R3661
9.2
MAIT T-cell nTPM: 12.0
Samples: 4
Max nTPM: 15.8
Min nTPM: 10.3
RHH5233_R3605
10.3
RHH5205_R3576
10.7
RHH5262_R3634
15.8
RHH5297_R3663
11.1
Memory CD4 T-cell TFH nTPM: 27.0
Samples: 4
Max nTPM: 44.6
Min nTPM: 12.2
RHH5300_R3666
30.0
RHH5236_R3608
44.6
RHH5265_R3637
21.2
RHH5208_R3579
12.2
Memory CD4 T-cell Th1 nTPM: 26.3
Samples: 4
Max nTPM: 41.0
Min nTPM: 19.5
RHH5210_R3581
19.5
RHH5302_R3668
41.0
RHH5238_R3610
23.9
RHH5267_R3639
20.7
Memory CD4 T-cell Th1/Th17 nTPM: 28.5
Samples: 4
Max nTPM: 47.1
Min nTPM: 16.1
RHH5303_R3669
47.1
RHH5211_R3582
26.7
RHH5239_R3611
16.1
RHH5268_R3640
24.2
Memory CD4 T-cell Th17 nTPM: 14.0
Samples: 4
Max nTPM: 23.7
Min nTPM: 8.7
RHH5304_R3670
12.2
RHH5212_R3583
23.7
RHH5240_R3612
8.7
RHH5269_R3641
11.5
Memory CD4 T-cell Th2 nTPM: 18.4
Samples: 4
Max nTPM: 31.1
Min nTPM: 7.7
RHH5305_R3671
26.8
RHH5213_R3584
7.7
RHH5241_R3613
31.1
RHH5270_R3642
7.9
Naive CD4 T-cell nTPM: 23.4
Samples: 4
Max nTPM: 36.3
Min nTPM: 12.0
RHH5306_R3672
36.3
RHH5214_R3585
29.9
RHH5242_R3614
15.4
RHH5271_R3643
12.0
Naive CD8 T-cell nTPM: 16.3
Samples: 4
Max nTPM: 23.8
Min nTPM: 5.7
RHH5201_R3572
5.7
RHH5229_R3601
13.9
RHH5258_R3630
21.9
RHH5287_R3659
23.8
Non-Vd2 gdTCR nTPM: 16.2
Samples: 4
Max nTPM: 35.1
Min nTPM: 4.2
RHH5235_R3607
9.1
RHH5264_R3636
16.5
RHH5207_R3578
4.2
RHH5299_R3665
35.1
T-reg nTPM: 23.7
Samples: 4
Max nTPM: 33.7
Min nTPM: 11.9
RHH5301_R3667
33.7
RHH5237_R3609
29.8
RHH5266_R3638
11.9
RHH5209_R3580
19.4
Terminal effector memory CD4 T-cell nTPM: 11.3
Samples: 2
Max nTPM: 19.9
Min nTPM: 2.7
RHH5243_R3615
2.7
RHH5272_R3644
19.9
Terminal effector memory CD8 T-cell nTPM: 24.7
Samples: 4
Max nTPM: 34.8
Min nTPM: 11.4
RHH5232_R3604
26.4
RHH5204_R3575
34.8
RHH5261_R3633
11.4
RHH5296_R3662
26.3
Vd2 gdTCR nTPM: 22.0
Samples: 4
Max nTPM: 41.2
Min nTPM: 14.5
RHH5234_R3606
15.2
RHH5206_R3577
17.2
RHH5263_R3635
14.5
RHH5298_R3664
41.2
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
