HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:158.7 nTPM
HPA Brain:588.0 nTPM
GTEx:158.7 nTPM
FANTOM5:424.2 Scaled Tags Per Million
Pig:468.7 nTPM
Mouse:992.2 nTPM
Allen mouse:22.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015313
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 588.0
Sample id Sample description nTPM
Hippocampus
nTPM: 430.2
1898 Male, age 80, left hemisphere 505.9
2621 Female, age 67, right hemisphere 498.0
2148 Female, age 91, left hemisphere 494.1
1855 Male, age 76, left hemisphere 408.1
1911 Female, age 85, right hemisphere 350.2
2529 Female, age 94, left hemisphere 325.1
Dentate gyrus
nTPM: 484.7
1927 Female, age 91, both hemispheres 660.8
2528 Male, age 74, both hemispheres 523.8
2530 Female, age 94, left hemisphere 522.3
2531 Female, age 67, both hemispheres 439.6
2010 Male, age 76, both hemispheres 432.1
2246 Female, age 85, both hemispheres 329.2
Entorhinal gyrus
nTPM: 411.1
2613 Female, age 94, left hemisphere 554.4
2764 Male, age 80, right hemisphere 470.9
1938 Female, age 85, left hemisphere 418.4
1787 Male, age 76, left hemisphere 404.5
2686 Male, age 75, right hemisphere 346.8
2117 Female, age 91, right hemisphere 271.7
Hippocampus, CA1
nTPM: 588.0
2749 Male, age 80, left hemisphere 1031.7
2527 Male, age 74, both hemispheres 587.7
2045 Male, age 76, both hemispheres 451.9
1873 Female, age 85, both hemispheres 448.3
2082 Female, age 91, right hemisphere 420.1
Hippocampus, CA2
nTPM: 451.7
1963 Male, age 80, left hemisphere 639.8
1892 Male, age 76, both hemispheres 491.4
2249 Male, age 74, both hemispheres 460.5
2437 Female, age 94, left hemisphere 446.5
2113 Female, age 91, right hemisphere 361.6
1940 Female, age 85, left hemisphere 310.5
Hippocampus, CA3
nTPM: 456.2
2137 Male, age 80, left hemisphere 578.4
2620 Female, age 94, left hemisphere 550.7
2861 Female, age 67, both hemispheres 445.1
1867 Male, age 76, both hemispheres 431.9
2436 Male, age 74, both hemispheres 431.8
1891 Female, age 85, both hemispheres 299.6
Parahippocampal cortex
nTPM: 406.5
1990 Female, age 91, right hemisphere 509.6
2245 Female, age 91, both hemispheres 491.5
1850 Male, age 80, both hemispheres 438.8
2250 Female, age 67, right hemisphere 438.4
1933 Female, age 85, both hemispheres 418.7
2622 Female, age 67, right hemisphere 378.5
2692 Male, age 74, both hemispheres 376.4
2532 Female, age 72, left hemisphere 352.5
2693 Female, age 94, both hemispheres 340.8
2018 Male, age 76, both hemispheres 320.2
Perirhinal gyrus
nTPM: 501.6
1847 Female, age 91, left hemisphere 826.7
1794 Male, age 80, right hemisphere 487.1
2521 Female, age 94, right hemisphere 469.7
1841 Female, age 85, right hemisphere 403.1
2848 Male, age 76, right hemisphere 321.7
Subiculum
nTPM: 359.4
2619 Male, age 74, both hemispheres 401.5
1901 Male, age 80, both hemispheres 391.1
1977 Female, age 85, both hemispheres 375.8
2438 Female, age 94, left hemisphere 369.7
2729 Female, age 91, right hemisphere 346.5
2042 Male, age 76, both hemispheres 271.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 158.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 158.7
Samples: 197

Max nTPM: 522.2
Min nTPM: 24.6
Std nTPM: 89.8
Median nTPM: 142.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 522.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 447.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 409.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 360.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 360.7
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 354.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 347.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 327.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 325.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 325.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 323.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 424.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 424.2
FF:10169-103B7 60 years, female 580.5
FF:10153-102I9 76 years, female 267.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 468.7
Pig sample Sample description nTPM
Subiculum
nTPM: 407.0
Samples: 4

Max nTPM: 519.0
Min nTPM: 331.5
Sample A Female 519.0
Sample B Female 405.4
Sample C Male 372.1
Sample D Male 331.5
Dorsal hippocampus
nTPM: 423.4
Samples: 4

Max nTPM: 495.4
Min nTPM: 348.7
Sample A Female 495.4
Sample B Female 474.9
Sample C Male 348.7
Sample D Male 374.6
Entorhinal cortex
nTPM: 468.7
Samples: 4

Max nTPM: 550.0
Min nTPM: 422.4
Sample A Female 469.6
Sample B Female 550.0
Sample C Male 432.7
Sample D Male 422.4
Ventral hippocampus
nTPM: 376.8
Samples: 4

Max nTPM: 440.7
Min nTPM: 326.0
Sample A Female 390.1
Sample B Female 326.0
Sample C Male 440.7
Sample D Male 350.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 992.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 992.2
Samples: 4

Max nTPM: 1068.8
Min nTPM: 927.9
Sample A Male 956.8
Sample B Male 1015.4
Sample C Female 927.9
Sample D Female 1068.8
Hippocampal formation
nTPM: 912.4
Samples: 4

Max nTPM: 940.8
Min nTPM: 873.2
Sample A Male 908.7
Sample B Male 926.8
Sample C Female 940.8
Sample D Female 873.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.0
69782109 Antisense, RP_050505_02_D01, Mouse strain C57BL/6J (56 days, male) 22.0

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