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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
168.9
nTPM
Monaco:
158.8
nTPM
Schmiedel:
95.2
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
168.9
HPA sample
nTPM
gdT-cell nTPM: 133.6
Samples: 6
Max nTPM: 157.1
Min nTPM: 97.1
P10809_1007
97.1
P10809_1022
146.5
P10809_1041
157.1
P10809_1060
129.4
P10809_1077
136.4
P10809_1098
135.2
MAIT T-cell nTPM: 130.8
Samples: 6
Max nTPM: 148.9
Min nTPM: 87.0
P10809_1006
87.0
P10809_1024
131.5
P10809_1043
148.9
P10809_1062
130.5
P10809_1083
143.4
P10809_1097
143.7
Memory CD4 T-cell nTPM: 132.3
Samples: 6
Max nTPM: 165.1
Min nTPM: 93.2
P10809_1014
93.2
P10809_1026
165.1
P10809_1045
136.7
P10809_1064
130.6
P10809_1086
139.7
P10809_1113
128.2
Memory CD8 T-cell nTPM: 141.4
Samples: 5
Max nTPM: 182.7
Min nTPM: 97.9
P10809_1012
97.9
P10809_1027
182.7
P10809_1046
138.0
P10809_1065
150.0
P10809_1111
138.2
Naive CD4 T-cell nTPM: 127.1
Samples: 6
Max nTPM: 159.8
Min nTPM: 87.9
P10809_1015
87.9
P10809_1030
130.3
P10809_1049
159.8
P10809_1068
118.6
P10809_1085
151.1
P10809_1112
114.8
Naive CD8 T-cell nTPM: 131.7
Samples: 6
Max nTPM: 164.7
Min nTPM: 93.8
P10809_1016
93.8
P10809_1031
164.7
P10809_1050
135.8
P10809_1069
152.2
P10809_1087
133.4
P10809_1110
110.4
T-reg nTPM: 168.9
Samples: 6
Max nTPM: 198.3
Min nTPM: 111.4
P10809_1018
111.4
P10809_1037
188.0
P10809_1056
198.3
P10809_1075
171.6
P10809_1094
175.4
P10809_1106
168.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
158.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 104.4
Samples: 4
Max nTPM: 127.5
Min nTPM: 83.5
RHH5202_R3573
110.1
RHH5230_R3602
96.3
RHH5259_R3631
83.5
RHH5288_R3660
127.5
Effector memory CD8 T-cell nTPM: 123.3
Samples: 4
Max nTPM: 164.0
Min nTPM: 105.5
RHH5203_R3574
164.0
RHH5231_R3603
108.8
RHH5260_R3632
105.5
RHH5289_R3661
115.0
MAIT T-cell nTPM: 126.4
Samples: 4
Max nTPM: 141.7
Min nTPM: 112.9
RHH5233_R3605
112.9
RHH5205_R3576
125.3
RHH5262_R3634
125.6
RHH5297_R3663
141.7
Memory CD4 T-cell TFH nTPM: 135.4
Samples: 4
Max nTPM: 190.3
Min nTPM: 88.6
RHH5300_R3666
117.8
RHH5236_R3608
190.3
RHH5265_R3637
88.6
RHH5208_R3579
144.7
Memory CD4 T-cell Th1 nTPM: 115.2
Samples: 4
Max nTPM: 157.4
Min nTPM: 71.4
RHH5210_R3581
125.5
RHH5302_R3668
157.4
RHH5238_R3610
71.4
RHH5267_R3639
106.6
Memory CD4 T-cell Th1/Th17 nTPM: 121.5
Samples: 4
Max nTPM: 167.7
Min nTPM: 71.8
RHH5303_R3669
167.2
RHH5211_R3582
167.7
RHH5239_R3611
79.3
RHH5268_R3640
71.8
Memory CD4 T-cell Th17 nTPM: 109.8
Samples: 4
Max nTPM: 129.7
Min nTPM: 92.8
RHH5304_R3670
116.3
RHH5212_R3583
129.7
RHH5240_R3612
100.3
RHH5269_R3641
92.8
Memory CD4 T-cell Th2 nTPM: 127.7
Samples: 4
Max nTPM: 150.5
Min nTPM: 104.1
RHH5305_R3671
118.4
RHH5213_R3584
150.5
RHH5241_R3613
137.6
RHH5270_R3642
104.1
Naive CD4 T-cell nTPM: 119.5
Samples: 4
Max nTPM: 144.5
Min nTPM: 102.9
RHH5306_R3672
102.9
RHH5214_R3585
144.5
RHH5242_R3614
126.5
RHH5271_R3643
104.1
Naive CD8 T-cell nTPM: 98.5
Samples: 4
Max nTPM: 140.4
Min nTPM: 71.0
RHH5201_R3572
140.4
RHH5229_R3601
71.0
RHH5258_R3630
106.5
RHH5287_R3659
76.1
Non-Vd2 gdTCR nTPM: 135.8
Samples: 4
Max nTPM: 156.2
Min nTPM: 92.1
RHH5235_R3607
92.1
RHH5264_R3636
152.0
RHH5207_R3578
156.2
RHH5299_R3665
142.7
T-reg nTPM: 118.4
Samples: 4
Max nTPM: 146.6
Min nTPM: 93.0
RHH5301_R3667
123.3
RHH5237_R3609
146.6
RHH5266_R3638
93.0
RHH5209_R3580
110.6
Terminal effector memory CD4 T-cell nTPM: 119.7
Samples: 2
Max nTPM: 125.9
Min nTPM: 113.4
RHH5243_R3615
113.4
RHH5272_R3644
125.9
Terminal effector memory CD8 T-cell nTPM: 158.8
Samples: 4
Max nTPM: 180.1
Min nTPM: 132.0
RHH5232_R3604
166.7
RHH5204_R3575
180.1
RHH5261_R3633
132.0
RHH5296_R3662
156.4
Vd2 gdTCR nTPM: 155.9
Samples: 4
Max nTPM: 185.7
Min nTPM: 126.6
RHH5234_R3606
126.6
RHH5206_R3577
185.7
RHH5263_R3635
135.1
RHH5298_R3664
176.0
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
