HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:22.3 nTPM
HPA Brain:30.7 nTPM
GTEx:22.3 nTPM
FANTOM5:47.2 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:14.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027766
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.7
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
2148 Female, age 91, left hemisphere 32.0
1855 Male, age 76, left hemisphere 30.9
1898 Male, age 80, left hemisphere 30.7
2529 Female, age 94, left hemisphere 30.3
2621 Female, age 67, right hemisphere 29.2
1911 Female, age 85, right hemisphere 24.8
Dentate gyrus
nTPM: 30.7
2530 Female, age 94, left hemisphere 32.7
2531 Female, age 67, both hemispheres 32.5
2528 Male, age 74, both hemispheres 32.1
2246 Female, age 85, both hemispheres 29.4
2010 Male, age 76, both hemispheres 28.9
1927 Female, age 91, both hemispheres 28.4
Entorhinal gyrus
nTPM: 30.0
2613 Female, age 94, left hemisphere 36.0
2764 Male, age 80, right hemisphere 32.3
1938 Female, age 85, left hemisphere 30.9
1787 Male, age 76, left hemisphere 28.2
2117 Female, age 91, right hemisphere 27.8
2686 Male, age 75, right hemisphere 24.9
Hippocampus, CA1
nTPM: 29.0
2749 Male, age 80, left hemisphere 33.0
2045 Male, age 76, both hemispheres 29.5
1873 Female, age 85, both hemispheres 28.6
2527 Male, age 74, both hemispheres 28.3
2082 Female, age 91, right hemisphere 25.3
Hippocampus, CA2
nTPM: 28.8
1963 Male, age 80, left hemisphere 33.1
1892 Male, age 76, both hemispheres 31.8
2437 Female, age 94, left hemisphere 30.4
2249 Male, age 74, both hemispheres 26.5
1940 Female, age 85, left hemisphere 25.6
2113 Female, age 91, right hemisphere 25.5
Hippocampus, CA3
nTPM: 30.1
2620 Female, age 94, left hemisphere 34.8
2861 Female, age 67, both hemispheres 31.8
2137 Male, age 80, left hemisphere 29.9
1867 Male, age 76, both hemispheres 29.1
2436 Male, age 74, both hemispheres 28.6
1891 Female, age 85, both hemispheres 26.1
Parahippocampal cortex
nTPM: 26.6
1850 Male, age 80, both hemispheres 29.3
1990 Female, age 91, right hemisphere 28.4
2245 Female, age 91, both hemispheres 28.2
1933 Female, age 85, both hemispheres 27.7
2532 Female, age 72, left hemisphere 26.5
2692 Male, age 74, both hemispheres 25.9
2622 Female, age 67, right hemisphere 25.2
2693 Female, age 94, both hemispheres 25.1
2250 Female, age 67, right hemisphere 24.8
2018 Male, age 76, both hemispheres 24.7
Perirhinal gyrus
nTPM: 27.8
1847 Female, age 91, left hemisphere 31.4
1794 Male, age 80, right hemisphere 29.9
2521 Female, age 94, right hemisphere 27.8
2848 Male, age 76, right hemisphere 25.0
1841 Female, age 85, right hemisphere 24.7
Subiculum
nTPM: 27.1
1977 Female, age 85, both hemispheres 28.7
2729 Female, age 91, right hemisphere 27.6
2619 Male, age 74, both hemispheres 27.4
1901 Male, age 80, both hemispheres 27.2
2438 Female, age 94, left hemisphere 26.6
2042 Male, age 76, both hemispheres 25.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.3
Samples: 197

Max nTPM: 41.6
Min nTPM: 8.3
Std nTPM: 5.9
Median nTPM: 21.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 41.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 41.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 39.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 36.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 36.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 34.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 33.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 33.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 33.3
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 32.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 32.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 47.2
FF:10153-102I9 76 years, female 48.8
FF:10169-103B7 60 years, female 45.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 22.2
Samples: 4

Max nTPM: 28.4
Min nTPM: 19.1
Sample A Female 28.4
Sample B Female 20.5
Sample C Male 20.6
Sample D Male 19.1
Dorsal hippocampus
nTPM: 22.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 19.2
Sample A Female 27.3
Sample B Female 23.1
Sample C Male 19.7
Sample D Male 19.2
Entorhinal cortex
nTPM: 23.1
Samples: 4

Max nTPM: 25.8
Min nTPM: 20.2
Sample A Female 24.7
Sample B Female 21.6
Sample C Male 25.8
Sample D Male 20.2
Ventral hippocampus
nTPM: 23.0
Samples: 4

Max nTPM: 27.9
Min nTPM: 16.6
Sample A Female 22.8
Sample B Female 16.6
Sample C Male 27.9
Sample D Male 24.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 15.6
Min nTPM: 13.1
Sample A Male 13.8
Sample B Male 13.1
Sample C Female 14.0
Sample D Female 15.6
Hippocampal formation
nTPM: 13.6
Samples: 4

Max nTPM: 13.7
Min nTPM: 13.5
Sample A Male 13.5
Sample B Male 13.5
Sample C Female 13.7
Sample D Female 13.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74357721 Antisense, RP_060119_03_C05, Mouse strain C57BL/6J (56 days, male) 0.2
80525751 Antisense, RP_071204_02_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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