HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.5 nTPM
HPA Brain:17.0 nTPM
GTEx:18.5 nTPM
FANTOM5:19.8 Scaled Tags Per Million
Pig:5.6 nTPM
Mouse:5.1 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064055
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.1
2148 Female, age 91, left hemisphere 13.7
1911 Female, age 85, right hemisphere 13.3
2621 Female, age 67, right hemisphere 12.8
1855 Male, age 76, left hemisphere 12.1
1898 Male, age 80, left hemisphere 11.9
2529 Female, age 94, left hemisphere 9.1
Dentate gyrus
nTPM: 12.5
1927 Female, age 91, both hemispheres 14.9
2531 Female, age 67, both hemispheres 13.7
2010 Male, age 76, both hemispheres 13.6
2530 Female, age 94, left hemisphere 12.4
2246 Female, age 85, both hemispheres 10.4
2528 Male, age 74, both hemispheres 10.3
Entorhinal gyrus
nTPM: 10.2
2764 Male, age 80, right hemisphere 13.1
1787 Male, age 76, left hemisphere 10.9
2613 Female, age 94, left hemisphere 10.1
2686 Male, age 75, right hemisphere 9.8
1938 Female, age 85, left hemisphere 8.7
2117 Female, age 91, right hemisphere 8.5
Hippocampus, CA1
nTPM: 16.9
2749 Male, age 80, left hemisphere 38.4
2045 Male, age 76, both hemispheres 12.3
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 11.2
2082 Female, age 91, right hemisphere 11.2
Hippocampus, CA2
nTPM: 11.3
1892 Male, age 76, both hemispheres 15.8
1963 Male, age 80, left hemisphere 14.1
2113 Female, age 91, right hemisphere 10.8
2249 Male, age 74, both hemispheres 10.5
1940 Female, age 85, left hemisphere 9.0
2437 Female, age 94, left hemisphere 7.4
Hippocampus, CA3
nTPM: 17.0
2137 Male, age 80, left hemisphere 33.0
1867 Male, age 76, both hemispheres 19.4
2620 Female, age 94, left hemisphere 18.4
2861 Female, age 67, both hemispheres 13.9
2436 Male, age 74, both hemispheres 8.8
1891 Female, age 85, both hemispheres 8.6
Parahippocampal cortex
nTPM: 11.0
2532 Female, age 72, left hemisphere 14.8
2245 Female, age 91, both hemispheres 14.2
2693 Female, age 94, both hemispheres 12.9
1933 Female, age 85, both hemispheres 11.8
2250 Female, age 67, right hemisphere 11.2
1850 Male, age 80, both hemispheres 10.9
2622 Female, age 67, right hemisphere 10.0
2018 Male, age 76, both hemispheres 9.9
1990 Female, age 91, right hemisphere 8.4
2692 Male, age 74, both hemispheres 6.1
Perirhinal gyrus
nTPM: 12.4
2521 Female, age 94, right hemisphere 14.9
1841 Female, age 85, right hemisphere 13.5
1847 Female, age 91, left hemisphere 13.0
1794 Male, age 80, right hemisphere 11.8
2848 Male, age 76, right hemisphere 8.9
Subiculum
nTPM: 10.4
2042 Male, age 76, both hemispheres 16.3
1901 Male, age 80, both hemispheres 12.9
2729 Female, age 91, right hemisphere 12.0
1977 Female, age 85, both hemispheres 10.5
2619 Male, age 74, both hemispheres 6.7
2438 Female, age 94, left hemisphere 4.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 53.4
Min nTPM: 3.1
Std nTPM: 9.9
Median nTPM: 16.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 53.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 52.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 49.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 44.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 44.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 41.0
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 40.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 40.4
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 39.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 39.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 37.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.8
FF:10169-103B7 60 years, female 30.1
FF:10153-102I9 76 years, female 9.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.6
Pig sample Sample description nTPM
Subiculum
nTPM: 4.9
Samples: 4

Max nTPM: 6.0
Min nTPM: 4.1
Sample A Female 6.0
Sample B Female 4.6
Sample C Male 4.8
Sample D Male 4.1
Dorsal hippocampus
nTPM: 5.6
Samples: 4

Max nTPM: 6.4
Min nTPM: 4.6
Sample A Female 6.3
Sample B Female 6.4
Sample C Male 4.9
Sample D Male 4.6
Entorhinal cortex
nTPM: 4.4
Samples: 4

Max nTPM: 4.9
Min nTPM: 3.8
Sample A Female 4.6
Sample B Female 4.4
Sample C Male 4.9
Sample D Male 3.8
Ventral hippocampus
nTPM: 5.4
Samples: 4

Max nTPM: 6.9
Min nTPM: 3.6
Sample A Female 5.1
Sample B Female 3.6
Sample C Male 6.9
Sample D Male 6.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.9
Samples: 4

Max nTPM: 4.5
Min nTPM: 3.4
Sample A Male 4.5
Sample B Male 3.4
Sample C Female 3.8
Sample D Female 4.0
Hippocampal formation
nTPM: 5.1
Samples: 4

Max nTPM: 5.7
Min nTPM: 4.2
Sample A Male 4.2
Sample B Male 5.7
Sample C Female 5.2
Sample D Female 5.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
68162265 Antisense, RP_041122_02_F11, Mouse strain C57BL/6J (56 days, male) 0.6

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