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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
26.1
nTPM
Monaco:
21.8
nTPM
Schmiedel:
25.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
26.1
HPA sample
nTPM
gdT-cell nTPM: 14.9
Samples: 6
Max nTPM: 25.9
Min nTPM: 5.2
P10809_1007
25.9
P10809_1022
12.3
P10809_1041
15.2
P10809_1060
5.2
P10809_1077
15.8
P10809_1098
15.0
MAIT T-cell nTPM: 12.8
Samples: 6
Max nTPM: 26.7
Min nTPM: 3.7
P10809_1006
19.1
P10809_1024
6.0
P10809_1043
11.4
P10809_1062
3.7
P10809_1083
9.6
P10809_1097
26.7
Memory CD4 T-cell nTPM: 14.5
Samples: 6
Max nTPM: 27.7
Min nTPM: 6.5
P10809_1014
27.7
P10809_1026
13.1
P10809_1045
19.1
P10809_1064
13.3
P10809_1086
7.1
P10809_1113
6.5
Memory CD8 T-cell nTPM: 16.3
Samples: 5
Max nTPM: 26.1
Min nTPM: 8.7
P10809_1012
21.2
P10809_1027
8.7
P10809_1046
26.1
P10809_1065
12.6
P10809_1111
13.0
Naive CD4 T-cell nTPM: 26.1
Samples: 6
Max nTPM: 39.7
Min nTPM: 18.2
P10809_1015
29.2
P10809_1030
31.4
P10809_1049
39.7
P10809_1068
18.6
P10809_1085
18.2
P10809_1112
19.3
Naive CD8 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 20.6
Min nTPM: 5.8
P10809_1016
20.6
P10809_1031
8.1
P10809_1050
17.9
P10809_1069
10.1
P10809_1087
5.8
P10809_1110
18.3
T-reg nTPM: 0.9
Samples: 6
Max nTPM: 2.0
Min nTPM: 0.0
P10809_1018
2.0
P10809_1037
1.8
P10809_1056
0.8
P10809_1075
0.7
P10809_1094
0.0
P10809_1106
0.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
21.8
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 11.9
Samples: 4
Max nTPM: 21.3
Min nTPM: 6.5
RHH5202_R3573
6.5
RHH5230_R3602
21.3
RHH5259_R3631
11.5
RHH5288_R3660
8.2
Effector memory CD8 T-cell nTPM: 7.3
Samples: 4
Max nTPM: 17.6
Min nTPM: 2.5
RHH5203_R3574
4.6
RHH5231_R3603
17.6
RHH5260_R3632
4.5
RHH5289_R3661
2.5
MAIT T-cell nTPM: 10.0
Samples: 4
Max nTPM: 24.6
Min nTPM: 2.4
RHH5233_R3605
7.3
RHH5205_R3576
2.4
RHH5262_R3634
5.5
RHH5297_R3663
24.6
Memory CD4 T-cell TFH nTPM: 14.6
Samples: 4
Max nTPM: 27.7
Min nTPM: 3.6
RHH5300_R3666
23.0
RHH5236_R3608
27.7
RHH5265_R3637
3.6
RHH5208_R3579
4.2
Memory CD4 T-cell Th1 nTPM: 15.9
Samples: 4
Max nTPM: 28.9
Min nTPM: 7.2
RHH5210_R3581
8.7
RHH5302_R3668
18.9
RHH5238_R3610
28.9
RHH5267_R3639
7.2
Memory CD4 T-cell Th1/Th17 nTPM: 11.1
Samples: 4
Max nTPM: 23.0
Min nTPM: 5.9
RHH5303_R3669
5.9
RHH5211_R3582
23.0
RHH5239_R3611
6.7
RHH5268_R3640
8.9
Memory CD4 T-cell Th17 nTPM: 9.5
Samples: 4
Max nTPM: 17.4
Min nTPM: 3.7
RHH5304_R3670
9.6
RHH5212_R3583
17.4
RHH5240_R3612
7.3
RHH5269_R3641
3.7
Memory CD4 T-cell Th2 nTPM: 12.3
Samples: 4
Max nTPM: 17.5
Min nTPM: 6.5
RHH5305_R3671
17.5
RHH5213_R3584
16.0
RHH5241_R3613
9.0
RHH5270_R3642
6.5
Naive CD4 T-cell nTPM: 19.4
Samples: 4
Max nTPM: 30.1
Min nTPM: 7.1
RHH5306_R3672
30.1
RHH5214_R3585
26.3
RHH5242_R3614
7.1
RHH5271_R3643
13.9
Naive CD8 T-cell nTPM: 11.7
Samples: 4
Max nTPM: 20.7
Min nTPM: 0.7
RHH5201_R3572
0.7
RHH5229_R3601
9.8
RHH5258_R3630
20.7
RHH5287_R3659
15.7
Non-Vd2 gdTCR nTPM: 15.6
Samples: 4
Max nTPM: 31.4
Min nTPM: 0.5
RHH5235_R3607
21.3
RHH5264_R3636
0.5
RHH5207_R3578
9.3
RHH5299_R3665
31.4
T-reg nTPM: 14.7
Samples: 4
Max nTPM: 29.3
Min nTPM: 7.6
RHH5301_R3667
29.3
RHH5237_R3609
10.4
RHH5266_R3638
7.6
RHH5209_R3580
11.3
Terminal effector memory CD4 T-cell nTPM: 16.5
Samples: 2
Max nTPM: 24.3
Min nTPM: 8.7
RHH5243_R3615
24.3
RHH5272_R3644
8.7
Terminal effector memory CD8 T-cell nTPM: 15.3
Samples: 4
Max nTPM: 32.7
Min nTPM: 3.8
RHH5232_R3604
9.5
RHH5204_R3575
32.7
RHH5261_R3633
3.8
RHH5296_R3662
15.3
Vd2 gdTCR nTPM: 21.8
Samples: 4
Max nTPM: 38.5
Min nTPM: 5.2
RHH5234_R3606
22.5
RHH5206_R3577
20.9
RHH5263_R3635
5.2
RHH5298_R3664
38.5
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
