HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:2.8 nTPM
HPA Brain:38.8 nTPM
GTEx:2.8 nTPM
FANTOM5:46.0 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:22.7 nTPM
Allen mouse:1.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043019Antibody HPA043586
Glial cells LowNot detected
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.8
Sample id Sample description nTPM
Hippocampus
nTPM: 36.0
1898 Male, age 80, left hemisphere 39.3
2148 Female, age 91, left hemisphere 39.0
1855 Male, age 76, left hemisphere 38.7
2621 Female, age 67, right hemisphere 34.5
2529 Female, age 94, left hemisphere 33.9
1911 Female, age 85, right hemisphere 30.4
Dentate gyrus
nTPM: 35.9
2528 Male, age 74, both hemispheres 38.6
2530 Female, age 94, left hemisphere 38.5
2531 Female, age 67, both hemispheres 37.0
2010 Male, age 76, both hemispheres 36.1
1927 Female, age 91, both hemispheres 32.8
2246 Female, age 85, both hemispheres 32.1
Entorhinal gyrus
nTPM: 38.5
2613 Female, age 94, left hemisphere 46.4
2764 Male, age 80, right hemisphere 41.5
2117 Female, age 91, right hemisphere 38.0
1787 Male, age 76, left hemisphere 37.3
1938 Female, age 85, left hemisphere 36.5
2686 Male, age 75, right hemisphere 31.2
Hippocampus, CA1
nTPM: 37.2
2749 Male, age 80, left hemisphere 42.9
2527 Male, age 74, both hemispheres 36.9
1873 Female, age 85, both hemispheres 36.4
2045 Male, age 76, both hemispheres 35.0
2082 Female, age 91, right hemisphere 34.7
Hippocampus, CA2
nTPM: 38.0
1892 Male, age 76, both hemispheres 42.2
1963 Male, age 80, left hemisphere 40.1
1940 Female, age 85, left hemisphere 36.9
2437 Female, age 94, left hemisphere 36.7
2113 Female, age 91, right hemisphere 36.1
2249 Male, age 74, both hemispheres 35.6
Hippocampus, CA3
nTPM: 36.5
2436 Male, age 74, both hemispheres 41.6
2861 Female, age 67, both hemispheres 38.7
1867 Male, age 76, both hemispheres 36.2
2620 Female, age 94, left hemisphere 36.0
2137 Male, age 80, left hemisphere 35.4
1891 Female, age 85, both hemispheres 30.9
Parahippocampal cortex
nTPM: 34.6
2693 Female, age 94, both hemispheres 38.1
1850 Male, age 80, both hemispheres 36.5
1933 Female, age 85, both hemispheres 36.0
2018 Male, age 76, both hemispheres 36.0
1990 Female, age 91, right hemisphere 34.8
2622 Female, age 67, right hemisphere 34.3
2532 Female, age 72, left hemisphere 34.1
2692 Male, age 74, both hemispheres 34.0
2245 Female, age 91, both hemispheres 32.4
2250 Female, age 67, right hemisphere 30.5
Perirhinal gyrus
nTPM: 38.8
2521 Female, age 94, right hemisphere 44.3
1794 Male, age 80, right hemisphere 42.6
1847 Female, age 91, left hemisphere 41.2
1841 Female, age 85, right hemisphere 34.0
2848 Male, age 76, right hemisphere 32.1
Subiculum
nTPM: 33.9
1977 Female, age 85, both hemispheres 36.0
2729 Female, age 91, right hemisphere 35.5
2042 Male, age 76, both hemispheres 33.4
1901 Male, age 80, both hemispheres 33.3
2619 Male, age 74, both hemispheres 33.1
2438 Female, age 94, left hemisphere 31.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 2.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 2.8
Samples: 197

Max nTPM: 14.1
Min nTPM: 0.0
Std nTPM: 3.4
Median nTPM: 1.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 14.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 14.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 13.0
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 12.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 11.9
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 11.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 11.7
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 11.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 10.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 10.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 10.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 46.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 46.0
FF:10153-102I9 76 years, female 51.6
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Subiculum
nTPM: 15.1
Samples: 4

Max nTPM: 18.9
Min nTPM: 12.8
Sample A Female 18.9
Sample B Female 13.6
Sample C Male 15.1
Sample D Male 12.8
Dorsal hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 20.0
Min nTPM: 12.3
Sample A Female 20.0
Sample B Female 16.9
Sample C Male 17.1
Sample D Male 12.3
Entorhinal cortex
nTPM: 15.3
Samples: 4

Max nTPM: 15.9
Min nTPM: 14.6
Sample A Female 15.8
Sample B Female 14.7
Sample C Male 15.9
Sample D Male 14.6
Ventral hippocampus
nTPM: 16.6
Samples: 4

Max nTPM: 20.0
Min nTPM: 11.6
Sample A Female 16.9
Sample B Female 11.6
Sample C Male 20.0
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.6
Samples: 4

Max nTPM: 23.8
Min nTPM: 20.4
Sample A Male 20.4
Sample B Male 21.1
Sample C Female 21.1
Sample D Female 23.8
Hippocampal formation
nTPM: 22.7
Samples: 4

Max nTPM: 24.1
Min nTPM: 20.6
Sample A Male 20.6
Sample B Male 24.1
Sample C Female 23.9
Sample D Female 22.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.4
71307256 Antisense, RP_050825_01_E07, Mouse strain C57BL/6J (56 days, male) 1.4

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