HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:148.5 nTPM
HPA Brain:96.5 nTPM
GTEx:148.5 nTPM
FANTOM5:151.7 Scaled Tags Per Million
Pig:94.8 nTPM
Mouse:130.2 nTPM
Allen mouse:7.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041222Antibody HPA043531Antibody CAB037202Antibody CAB037209
Glial cells Not detectedNot detectedMediumMedium
Neuronal cells MediumLowHighHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.5
Sample id Sample description nTPM
Hippocampus
nTPM: 84.2
1898 Male, age 80, left hemisphere 106.3
2529 Female, age 94, left hemisphere 87.8
2148 Female, age 91, left hemisphere 86.1
2621 Female, age 67, right hemisphere 83.3
1855 Male, age 76, left hemisphere 74.4
1911 Female, age 85, right hemisphere 67.4
Dentate gyrus
nTPM: 79.2
2530 Female, age 94, left hemisphere 104.2
1927 Female, age 91, both hemispheres 81.3
2010 Male, age 76, both hemispheres 78.7
2531 Female, age 67, both hemispheres 74.5
2528 Male, age 74, both hemispheres 68.5
2246 Female, age 85, both hemispheres 67.8
Entorhinal gyrus
nTPM: 90.1
2764 Male, age 80, right hemisphere 111.4
2613 Female, age 94, left hemisphere 91.4
1938 Female, age 85, left hemisphere 87.4
1787 Male, age 76, left hemisphere 85.6
2686 Male, age 75, right hemisphere 84.2
2117 Female, age 91, right hemisphere 80.5
Hippocampus, CA1
nTPM: 84.6
2749 Male, age 80, left hemisphere 133.2
1873 Female, age 85, both hemispheres 79.3
2527 Male, age 74, both hemispheres 76.0
2045 Male, age 76, both hemispheres 67.3
2082 Female, age 91, right hemisphere 67.2
Hippocampus, CA2
nTPM: 84.6
1963 Male, age 80, left hemisphere 106.1
1892 Male, age 76, both hemispheres 96.5
2437 Female, age 94, left hemisphere 93.2
1940 Female, age 85, left hemisphere 74.2
2113 Female, age 91, right hemisphere 71.7
2249 Male, age 74, both hemispheres 66.0
Hippocampus, CA3
nTPM: 81.7
2137 Male, age 80, left hemisphere 98.6
2861 Female, age 67, both hemispheres 95.7
1867 Male, age 76, both hemispheres 80.3
2620 Female, age 94, left hemisphere 73.5
2436 Male, age 74, both hemispheres 72.1
1891 Female, age 85, both hemispheres 70.0
Parahippocampal cortex
nTPM: 82.5
1850 Male, age 80, both hemispheres 103.4
2245 Female, age 91, both hemispheres 87.7
2622 Female, age 67, right hemisphere 85.5
2532 Female, age 72, left hemisphere 85.2
1990 Female, age 91, right hemisphere 84.8
1933 Female, age 85, both hemispheres 82.3
2250 Female, age 67, right hemisphere 81.4
2692 Male, age 74, both hemispheres 75.5
2018 Male, age 76, both hemispheres 72.3
2693 Female, age 94, both hemispheres 66.6
Perirhinal gyrus
nTPM: 96.5
1794 Male, age 80, right hemisphere 115.1
1847 Female, age 91, left hemisphere 106.1
1841 Female, age 85, right hemisphere 94.5
2848 Male, age 76, right hemisphere 84.4
2521 Female, age 94, right hemisphere 82.3
Subiculum
nTPM: 77.9
2438 Female, age 94, left hemisphere 86.8
1901 Male, age 80, both hemispheres 86.6
1977 Female, age 85, both hemispheres 84.4
2619 Male, age 74, both hemispheres 82.6
2042 Male, age 76, both hemispheres 63.8
2729 Female, age 91, right hemisphere 63.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 148.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 148.5
Samples: 197

Max nTPM: 351.0
Min nTPM: 64.5
Std nTPM: 44.3
Median nTPM: 142.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 351.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 315.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 304.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 291.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 273.1
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 242.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 239.7
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 238.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 232.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 228.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 228.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.7
FF:10169-103B7 60 years, female 162.0
FF:10153-102I9 76 years, female 141.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 94.8
Pig sample Sample description nTPM
Subiculum
nTPM: 87.8
Samples: 4

Max nTPM: 114.8
Min nTPM: 77.5
Sample A Female 114.8
Sample B Female 77.5
Sample C Male 79.6
Sample D Male 79.3
Dorsal hippocampus
nTPM: 94.8
Samples: 4

Max nTPM: 123.9
Min nTPM: 70.3
Sample A Female 123.9
Sample B Female 90.1
Sample C Male 94.9
Sample D Male 70.3
Entorhinal cortex
nTPM: 90.5
Samples: 4

Max nTPM: 97.4
Min nTPM: 78.7
Sample A Female 90.7
Sample B Female 97.4
Sample C Male 95.2
Sample D Male 78.7
Ventral hippocampus
nTPM: 91.4
Samples: 4

Max nTPM: 113.2
Min nTPM: 61.7
Sample A Female 91.4
Sample B Female 61.7
Sample C Male 113.2
Sample D Male 99.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 130.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 128.0
Samples: 4

Max nTPM: 135.8
Min nTPM: 121.6
Sample A Male 121.6
Sample B Male 124.2
Sample C Female 130.3
Sample D Female 135.8
Hippocampal formation
nTPM: 130.2
Samples: 4

Max nTPM: 138.6
Min nTPM: 120.4
Sample A Male 138.6
Sample B Male 120.4
Sample C Female 134.5
Sample D Female 127.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.0
71608348 Antisense, RP_050927_01_E04, Mouse strain C57BL/6J (56 days, male) 10.4
77620401 Antisense, RP_070205_01_F10, Mouse strain C57BL/6J (56 days, male) 6.3
79912552 Antisense, RP_080109_01_B07, Mouse strain C57BL/6J (56 days, male) 4.3

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