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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
15.8
nTPM
Monaco:
27.3
nTPM
Schmiedel:
20.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
15.8
HPA sample
nTPM
gdT-cell nTPM: 15.8
Samples: 6
Max nTPM: 25.5
Min nTPM: 10.4
P10809_1007
12.0
P10809_1022
13.0
P10809_1041
25.5
P10809_1060
10.4
P10809_1077
18.0
P10809_1098
15.9
MAIT T-cell nTPM: 14.5
Samples: 6
Max nTPM: 33.6
Min nTPM: 4.2
P10809_1006
7.0
P10809_1024
14.9
P10809_1043
10.4
P10809_1062
4.2
P10809_1083
16.9
P10809_1097
33.6
Memory CD4 T-cell nTPM: 13.5
Samples: 6
Max nTPM: 18.9
Min nTPM: 9.3
P10809_1014
9.3
P10809_1026
18.9
P10809_1045
17.7
P10809_1064
13.5
P10809_1086
12.1
P10809_1113
9.7
Memory CD8 T-cell nTPM: 13.9
Samples: 5
Max nTPM: 17.0
Min nTPM: 11.8
P10809_1012
12.5
P10809_1027
15.1
P10809_1046
17.0
P10809_1065
12.9
P10809_1111
11.8
Naive CD4 T-cell nTPM: 12.8
Samples: 6
Max nTPM: 26.9
Min nTPM: 6.2
P10809_1015
6.2
P10809_1030
13.4
P10809_1049
26.9
P10809_1068
10.2
P10809_1085
9.8
P10809_1112
10.4
Naive CD8 T-cell nTPM: 11.6
Samples: 6
Max nTPM: 19.9
Min nTPM: 6.5
P10809_1016
6.5
P10809_1031
15.9
P10809_1050
19.9
P10809_1069
9.6
P10809_1087
10.1
P10809_1110
7.7
T-reg nTPM: 13.2
Samples: 6
Max nTPM: 29.0
Min nTPM: 4.9
P10809_1018
4.9
P10809_1037
5.9
P10809_1056
29.0
P10809_1075
14.6
P10809_1094
9.8
P10809_1106
15.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 13.8
Samples: 4
Max nTPM: 28.4
Min nTPM: 7.0
RHH5202_R3573
7.0
RHH5230_R3602
28.4
RHH5259_R3631
9.5
RHH5288_R3660
10.3
Effector memory CD8 T-cell nTPM: 20.2
Samples: 4
Max nTPM: 27.4
Min nTPM: 8.7
RHH5203_R3574
20.5
RHH5231_R3603
27.4
RHH5260_R3632
24.2
RHH5289_R3661
8.7
MAIT T-cell nTPM: 24.4
Samples: 4
Max nTPM: 41.4
Min nTPM: 8.9
RHH5233_R3605
8.9
RHH5205_R3576
18.4
RHH5262_R3634
29.0
RHH5297_R3663
41.4
Memory CD4 T-cell TFH nTPM: 19.2
Samples: 4
Max nTPM: 32.8
Min nTPM: 5.7
RHH5300_R3666
32.8
RHH5236_R3608
16.3
RHH5265_R3637
21.9
RHH5208_R3579
5.7
Memory CD4 T-cell Th1 nTPM: 24.1
Samples: 4
Max nTPM: 33.8
Min nTPM: 14.8
RHH5210_R3581
20.6
RHH5302_R3668
27.2
RHH5238_R3610
14.8
RHH5267_R3639
33.8
Memory CD4 T-cell Th1/Th17 nTPM: 18.9
Samples: 4
Max nTPM: 29.0
Min nTPM: 9.9
RHH5303_R3669
9.9
RHH5211_R3582
23.5
RHH5239_R3611
13.0
RHH5268_R3640
29.0
Memory CD4 T-cell Th17 nTPM: 18.5
Samples: 4
Max nTPM: 29.4
Min nTPM: 5.9
RHH5304_R3670
16.1
RHH5212_R3583
29.4
RHH5240_R3612
5.9
RHH5269_R3641
22.5
Memory CD4 T-cell Th2 nTPM: 20.9
Samples: 4
Max nTPM: 27.5
Min nTPM: 12.4
RHH5305_R3671
27.1
RHH5213_R3584
16.5
RHH5241_R3613
12.4
RHH5270_R3642
27.5
Naive CD4 T-cell nTPM: 22.6
Samples: 4
Max nTPM: 35.9
Min nTPM: 17.3
RHH5306_R3672
35.9
RHH5214_R3585
18.5
RHH5242_R3614
17.3
RHH5271_R3643
18.7
Naive CD8 T-cell nTPM: 14.2
Samples: 4
Max nTPM: 17.2
Min nTPM: 9.7
RHH5201_R3572
9.7
RHH5229_R3601
17.2
RHH5258_R3630
15.7
RHH5287_R3659
14.2
Non-Vd2 gdTCR nTPM: 19.6
Samples: 4
Max nTPM: 33.8
Min nTPM: 10.7
RHH5235_R3607
17.8
RHH5264_R3636
16.1
RHH5207_R3578
10.7
RHH5299_R3665
33.8
T-reg nTPM: 17.6
Samples: 4
Max nTPM: 40.1
Min nTPM: 5.6
RHH5301_R3667
40.1
RHH5237_R3609
12.3
RHH5266_R3638
12.3
RHH5209_R3580
5.6
Terminal effector memory CD4 T-cell nTPM: 13.4
Samples: 2
Max nTPM: 16.0
Min nTPM: 10.7
RHH5243_R3615
16.0
RHH5272_R3644
10.7
Terminal effector memory CD8 T-cell nTPM: 24.2
Samples: 4
Max nTPM: 38.9
Min nTPM: 12.6
RHH5232_R3604
24.1
RHH5204_R3575
38.9
RHH5261_R3633
21.2
RHH5296_R3662
12.6
Vd2 gdTCR nTPM: 27.3
Samples: 4
Max nTPM: 34.1
Min nTPM: 17.6
RHH5234_R3606
24.7
RHH5206_R3577
34.1
RHH5263_R3635
17.6
RHH5298_R3664
32.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
