HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:45.6 nTPM
HPA Brain:49.5 nTPM
GTEx:45.6 nTPM
FANTOM5:98.4 Scaled Tags Per Million
Pig:54.7 nTPM
Mouse:175.6 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003909Antibody CAB009021
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 45.5
2621 Female, age 67, right hemisphere 49.9
1898 Male, age 80, left hemisphere 48.9
1855 Male, age 76, left hemisphere 47.9
2148 Female, age 91, left hemisphere 43.9
1911 Female, age 85, right hemisphere 43.3
2529 Female, age 94, left hemisphere 39.0
Dentate gyrus
nTPM: 45.7
2531 Female, age 67, both hemispheres 48.9
1927 Female, age 91, both hemispheres 47.3
2010 Male, age 76, both hemispheres 46.8
2246 Female, age 85, both hemispheres 45.0
2530 Female, age 94, left hemisphere 43.6
2528 Male, age 74, both hemispheres 42.9
Entorhinal gyrus
nTPM: 42.9
1938 Female, age 85, left hemisphere 48.6
2764 Male, age 80, right hemisphere 45.6
1787 Male, age 76, left hemisphere 42.6
2117 Female, age 91, right hemisphere 41.4
2613 Female, age 94, left hemisphere 40.6
2686 Male, age 75, right hemisphere 38.6
Hippocampus, CA1
nTPM: 47.7
2749 Male, age 80, left hemisphere 54.4
1873 Female, age 85, both hemispheres 50.7
2045 Male, age 76, both hemispheres 48.4
2527 Male, age 74, both hemispheres 43.1
2082 Female, age 91, right hemisphere 41.7
Hippocampus, CA2
nTPM: 43.8
1892 Male, age 76, both hemispheres 50.6
1963 Male, age 80, left hemisphere 48.0
1940 Female, age 85, left hemisphere 41.5
2113 Female, age 91, right hemisphere 41.5
2249 Male, age 74, both hemispheres 41.1
2437 Female, age 94, left hemisphere 40.2
Hippocampus, CA3
nTPM: 49.5
2620 Female, age 94, left hemisphere 53.8
2137 Male, age 80, left hemisphere 53.1
1867 Male, age 76, both hemispheres 52.6
2861 Female, age 67, both hemispheres 52.2
1891 Female, age 85, both hemispheres 44.0
2436 Male, age 74, both hemispheres 41.5
Parahippocampal cortex
nTPM: 42.8
1850 Male, age 80, both hemispheres 47.0
2018 Male, age 76, both hemispheres 46.3
2245 Female, age 91, both hemispheres 43.4
1933 Female, age 85, both hemispheres 43.3
2532 Female, age 72, left hemisphere 43.1
1990 Female, age 91, right hemisphere 42.0
2693 Female, age 94, both hemispheres 41.7
2622 Female, age 67, right hemisphere 41.3
2250 Female, age 67, right hemisphere 41.0
2692 Male, age 74, both hemispheres 38.8
Perirhinal gyrus
nTPM: 48.8
1841 Female, age 85, right hemisphere 54.6
1847 Female, age 91, left hemisphere 53.2
1794 Male, age 80, right hemisphere 49.3
2848 Male, age 76, right hemisphere 44.5
2521 Female, age 94, right hemisphere 42.3
Subiculum
nTPM: 43.5
2438 Female, age 94, left hemisphere 45.9
1977 Female, age 85, both hemispheres 45.2
2042 Male, age 76, both hemispheres 44.2
1901 Male, age 80, both hemispheres 43.7
2729 Female, age 91, right hemisphere 41.5
2619 Male, age 74, both hemispheres 40.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.6
Samples: 197

Max nTPM: 71.2
Min nTPM: 29.7
Std nTPM: 7.8
Median nTPM: 45.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 71.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 63.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 62.8
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 62.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 62.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 61.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 61.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 61.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 61.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 59.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 58.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 98.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 98.4
FF:10169-103B7 60 years, female 116.3
FF:10153-102I9 76 years, female 80.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.7
Pig sample Sample description nTPM
Subiculum
nTPM: 49.3
Samples: 4

Max nTPM: 66.1
Min nTPM: 41.3
Sample A Female 66.1
Sample B Female 43.6
Sample C Male 46.2
Sample D Male 41.3
Dorsal hippocampus
nTPM: 54.7
Samples: 4

Max nTPM: 65.1
Min nTPM: 47.1
Sample A Female 65.1
Sample B Female 58.8
Sample C Male 47.1
Sample D Male 47.7
Entorhinal cortex
nTPM: 46.6
Samples: 4

Max nTPM: 51.3
Min nTPM: 40.3
Sample A Female 51.3
Sample B Female 48.7
Sample C Male 46.1
Sample D Male 40.3
Ventral hippocampus
nTPM: 52.3
Samples: 4

Max nTPM: 60.3
Min nTPM: 42.6
Sample A Female 50.3
Sample B Female 42.6
Sample C Male 60.3
Sample D Male 56.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 175.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 169.1
Samples: 4

Max nTPM: 179.6
Min nTPM: 156.0
Sample A Male 156.0
Sample B Male 173.4
Sample C Female 167.3
Sample D Female 179.6
Hippocampal formation
nTPM: 175.6
Samples: 4

Max nTPM: 195.2
Min nTPM: 163.7
Sample A Male 195.2
Sample B Male 170.0
Sample C Female 163.7
Sample D Female 173.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
45666 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 2.7
67936385 Antisense, RP_040324_01_H03, Mouse strain C57BL/6J (56 days, male) 0.4

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