HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:409.8 nTPM
HPA Brain:264.8 nTPM
GTEx:409.8 nTPM
FANTOM5:60.2 Scaled Tags Per Million
Pig:158.6 nTPM
Mouse:487.2 nTPM
Allen mouse:9.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA064006
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 264.8
Sample id Sample description nTPM
Hippocampus
nTPM: 238.8
1898 Male, age 80, left hemisphere 292.9
2529 Female, age 94, left hemisphere 263.4
1855 Male, age 76, left hemisphere 244.3
2621 Female, age 67, right hemisphere 228.6
1911 Female, age 85, right hemisphere 212.3
2148 Female, age 91, left hemisphere 191.5
Dentate gyrus
nTPM: 260.2
2530 Female, age 94, left hemisphere 348.9
2010 Male, age 76, both hemispheres 283.2
1927 Female, age 91, both hemispheres 253.8
2528 Male, age 74, both hemispheres 236.4
2246 Female, age 85, both hemispheres 236.2
2531 Female, age 67, both hemispheres 202.5
Entorhinal gyrus
nTPM: 203.6
2764 Male, age 80, right hemisphere 227.4
1787 Male, age 76, left hemisphere 220.0
1938 Female, age 85, left hemisphere 216.1
2117 Female, age 91, right hemisphere 207.3
2613 Female, age 94, left hemisphere 183.6
2686 Male, age 75, right hemisphere 167.1
Hippocampus, CA1
nTPM: 264.8
2749 Male, age 80, left hemisphere 356.8
1873 Female, age 85, both hemispheres 254.1
2527 Male, age 74, both hemispheres 254.1
2045 Male, age 76, both hemispheres 242.5
2082 Female, age 91, right hemisphere 216.8
Hippocampus, CA2
nTPM: 256.7
1963 Male, age 80, left hemisphere 319.7
1892 Male, age 76, both hemispheres 270.2
2437 Female, age 94, left hemisphere 270.1
2249 Male, age 74, both hemispheres 263.3
1940 Female, age 85, left hemisphere 217.8
2113 Female, age 91, right hemisphere 198.9
Hippocampus, CA3
nTPM: 236.0
2137 Male, age 80, left hemisphere 275.6
2436 Male, age 74, both hemispheres 259.4
1867 Male, age 76, both hemispheres 235.9
2620 Female, age 94, left hemisphere 230.6
2861 Female, age 67, both hemispheres 217.9
1891 Female, age 85, both hemispheres 197.0
Parahippocampal cortex
nTPM: 214.7
2245 Female, age 91, both hemispheres 266.2
1933 Female, age 85, both hemispheres 242.0
1850 Male, age 80, both hemispheres 234.0
2532 Female, age 72, left hemisphere 233.9
2018 Male, age 76, both hemispheres 223.2
2250 Female, age 67, right hemisphere 211.5
1990 Female, age 91, right hemisphere 210.6
2692 Male, age 74, both hemispheres 181.2
2622 Female, age 67, right hemisphere 174.8
2693 Female, age 94, both hemispheres 169.7
Perirhinal gyrus
nTPM: 233.0
1847 Female, age 91, left hemisphere 268.5
1794 Male, age 80, right hemisphere 256.4
1841 Female, age 85, right hemisphere 232.9
2521 Female, age 94, right hemisphere 214.7
2848 Male, age 76, right hemisphere 192.3
Subiculum
nTPM: 230.7
2438 Female, age 94, left hemisphere 276.2
1977 Female, age 85, both hemispheres 238.3
1901 Male, age 80, both hemispheres 237.9
2619 Male, age 74, both hemispheres 212.6
2042 Male, age 76, both hemispheres 211.9
2729 Female, age 91, right hemisphere 207.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 409.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 409.8
Samples: 197

Max nTPM: 905.7
Min nTPM: 186.1
Std nTPM: 120.4
Median nTPM: 390.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 905.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 901.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 795.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 778.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 727.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 714.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 687.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 649.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 647.6
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 642.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 639.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.2
FF:10169-103B7 60 years, female 69.5
FF:10153-102I9 76 years, female 50.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 158.6
Pig sample Sample description nTPM
Subiculum
nTPM: 119.9
Samples: 4

Max nTPM: 158.1
Min nTPM: 98.4
Sample A Female 158.1
Sample B Female 111.0
Sample C Male 111.9
Sample D Male 98.4
Dorsal hippocampus
nTPM: 158.7
Samples: 4

Max nTPM: 219.3
Min nTPM: 110.0
Sample A Female 219.3
Sample B Female 147.4
Sample C Male 157.9
Sample D Male 110.0
Entorhinal cortex
nTPM: 125.1
Samples: 4

Max nTPM: 146.0
Min nTPM: 100.0
Sample A Female 119.6
Sample B Female 134.6
Sample C Male 146.0
Sample D Male 100.0
Ventral hippocampus
nTPM: 144.9
Samples: 4

Max nTPM: 175.4
Min nTPM: 100.3
Sample A Female 160.0
Sample B Female 100.3
Sample C Male 175.4
Sample D Male 144.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 487.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 478.7
Samples: 4

Max nTPM: 493.8
Min nTPM: 450.7
Sample A Male 450.7
Sample B Male 484.7
Sample C Female 485.4
Sample D Female 493.8
Hippocampal formation
nTPM: 487.2
Samples: 4

Max nTPM: 554.1
Min nTPM: 442.5
Sample A Male 456.1
Sample B Male 442.5
Sample C Female 496.2
Sample D Female 554.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.8
74822929 Antisense, RP_060321_01_A02, Mouse strain C57BL/6J (56 days, male) 9.8

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