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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
85.8
nTPM
Monaco:
361.7
nTPM
Schmiedel:
625.0
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
85.8
HPA sample
nTPM
gdT-cell nTPM: 53.5
Samples: 6
Max nTPM: 64.0
Min nTPM: 38.4
P10809_1007
49.6
P10809_1022
63.6
P10809_1041
56.3
P10809_1060
38.4
P10809_1077
49.1
P10809_1098
64.0
MAIT T-cell nTPM: 60.6
Samples: 6
Max nTPM: 71.6
Min nTPM: 44.8
P10809_1006
71.6
P10809_1024
66.2
P10809_1043
44.8
P10809_1062
62.2
P10809_1083
61.1
P10809_1097
57.5
Memory CD4 T-cell nTPM: 59.9
Samples: 6
Max nTPM: 69.1
Min nTPM: 42.2
P10809_1014
69.1
P10809_1026
52.3
P10809_1045
64.4
P10809_1064
64.2
P10809_1086
67.3
P10809_1113
42.2
Memory CD8 T-cell nTPM: 62.8
Samples: 5
Max nTPM: 72.0
Min nTPM: 43.6
P10809_1012
72.0
P10809_1027
43.6
P10809_1046
65.2
P10809_1065
62.5
P10809_1111
70.8
Naive CD4 T-cell nTPM: 85.8
Samples: 6
Max nTPM: 106.9
Min nTPM: 68.8
P10809_1015
95.9
P10809_1030
71.2
P10809_1049
68.8
P10809_1068
106.9
P10809_1085
82.5
P10809_1112
89.4
Naive CD8 T-cell nTPM: 75.5
Samples: 6
Max nTPM: 95.1
Min nTPM: 48.8
P10809_1016
86.8
P10809_1031
73.0
P10809_1050
64.8
P10809_1069
95.1
P10809_1087
48.8
P10809_1110
84.7
T-reg nTPM: 48.4
Samples: 6
Max nTPM: 57.0
Min nTPM: 35.0
P10809_1018
50.8
P10809_1037
55.1
P10809_1056
35.6
P10809_1075
56.6
P10809_1094
35.0
P10809_1106
57.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
361.7
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 227.6
Samples: 4
Max nTPM: 326.2
Min nTPM: 102.7
RHH5202_R3573
102.7
RHH5230_R3602
286.0
RHH5259_R3631
326.2
RHH5288_R3660
195.6
Effector memory CD8 T-cell nTPM: 176.2
Samples: 4
Max nTPM: 248.2
Min nTPM: 92.5
RHH5203_R3574
143.8
RHH5231_R3603
220.1
RHH5260_R3632
248.2
RHH5289_R3661
92.5
MAIT T-cell nTPM: 117.4
Samples: 4
Max nTPM: 141.2
Min nTPM: 95.3
RHH5233_R3605
141.2
RHH5205_R3576
129.2
RHH5262_R3634
95.3
RHH5297_R3663
103.8
Memory CD4 T-cell TFH nTPM: 263.0
Samples: 4
Max nTPM: 374.5
Min nTPM: 133.8
RHH5300_R3666
232.4
RHH5236_R3608
374.5
RHH5265_R3637
311.3
RHH5208_R3579
133.8
Memory CD4 T-cell Th1 nTPM: 272.2
Samples: 4
Max nTPM: 364.4
Min nTPM: 196.3
RHH5210_R3581
223.5
RHH5302_R3668
196.3
RHH5238_R3610
364.4
RHH5267_R3639
304.4
Memory CD4 T-cell Th1/Th17 nTPM: 187.6
Samples: 4
Max nTPM: 345.0
Min nTPM: 43.9
RHH5303_R3669
43.9
RHH5211_R3582
179.0
RHH5239_R3611
345.0
RHH5268_R3640
182.4
Memory CD4 T-cell Th17 nTPM: 222.5
Samples: 4
Max nTPM: 253.3
Min nTPM: 140.6
RHH5304_R3670
140.6
RHH5212_R3583
253.3
RHH5240_R3612
252.8
RHH5269_R3641
243.2
Memory CD4 T-cell Th2 nTPM: 249.5
Samples: 4
Max nTPM: 281.6
Min nTPM: 224.4
RHH5305_R3671
225.2
RHH5213_R3584
281.6
RHH5241_R3613
224.4
RHH5270_R3642
266.6
Naive CD4 T-cell nTPM: 361.7
Samples: 4
Max nTPM: 391.5
Min nTPM: 336.7
RHH5306_R3672
336.7
RHH5214_R3585
339.2
RHH5242_R3614
379.3
RHH5271_R3643
391.5
Naive CD8 T-cell nTPM: 295.2
Samples: 4
Max nTPM: 404.6
Min nTPM: 107.4
RHH5201_R3572
107.4
RHH5229_R3601
404.6
RHH5258_R3630
304.5
RHH5287_R3659
364.4
Non-Vd2 gdTCR nTPM: 208.2
Samples: 4
Max nTPM: 277.3
Min nTPM: 144.2
RHH5235_R3607
277.3
RHH5264_R3636
201.7
RHH5207_R3578
144.2
RHH5299_R3665
209.6
T-reg nTPM: 286.5
Samples: 4
Max nTPM: 384.7
Min nTPM: 201.2
RHH5301_R3667
201.2
RHH5237_R3609
384.7
RHH5266_R3638
243.7
RHH5209_R3580
316.3
Terminal effector memory CD4 T-cell nTPM: 309.1
Samples: 2
Max nTPM: 366.4
Min nTPM: 251.7
RHH5243_R3615
366.4
RHH5272_R3644
251.7
Terminal effector memory CD8 T-cell nTPM: 207.3
Samples: 4
Max nTPM: 297.6
Min nTPM: 102.4
RHH5232_R3604
297.6
RHH5204_R3575
176.8
RHH5261_R3633
252.3
RHH5296_R3662
102.4
Vd2 gdTCR nTPM: 181.6
Samples: 4
Max nTPM: 221.7
Min nTPM: 145.0
RHH5234_R3606
221.7
RHH5206_R3577
145.0
RHH5263_R3635
198.9
RHH5298_R3664
160.6
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
