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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
207.0
nTPM
Monaco:
40.9
nTPM
Schmiedel:
22.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
207.0
HPA sample
nTPM
gdT-cell nTPM: 178.8
Samples: 6
Max nTPM: 226.6
Min nTPM: 131.3
P10809_1007
131.5
P10809_1022
226.6
P10809_1041
192.4
P10809_1060
131.3
P10809_1077
179.2
P10809_1098
212.0
MAIT T-cell nTPM: 112.5
Samples: 6
Max nTPM: 164.5
Min nTPM: 76.9
P10809_1006
76.9
P10809_1024
101.1
P10809_1043
124.1
P10809_1062
111.2
P10809_1083
96.9
P10809_1097
164.5
Memory CD4 T-cell nTPM: 147.0
Samples: 6
Max nTPM: 186.5
Min nTPM: 97.8
P10809_1014
97.8
P10809_1026
186.5
P10809_1045
148.4
P10809_1064
169.7
P10809_1086
132.6
P10809_1113
147.0
Memory CD8 T-cell nTPM: 183.3
Samples: 5
Max nTPM: 215.5
Min nTPM: 118.7
P10809_1012
118.7
P10809_1027
215.5
P10809_1046
197.8
P10809_1065
173.0
P10809_1111
211.6
Naive CD4 T-cell nTPM: 102.5
Samples: 6
Max nTPM: 144.4
Min nTPM: 58.1
P10809_1015
58.1
P10809_1030
111.7
P10809_1049
144.4
P10809_1068
89.2
P10809_1085
97.1
P10809_1112
114.3
Naive CD8 T-cell nTPM: 140.0
Samples: 6
Max nTPM: 191.8
Min nTPM: 65.6
P10809_1016
65.6
P10809_1031
156.0
P10809_1050
125.2
P10809_1069
191.8
P10809_1087
177.0
P10809_1110
124.5
T-reg nTPM: 207.1
Samples: 6
Max nTPM: 274.6
Min nTPM: 121.7
P10809_1018
121.7
P10809_1037
185.3
P10809_1056
274.6
P10809_1075
208.5
P10809_1094
218.1
P10809_1106
234.2
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
40.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 20.8
Samples: 4
Max nTPM: 25.1
Min nTPM: 15.7
RHH5202_R3573
15.7
RHH5230_R3602
22.5
RHH5259_R3631
25.1
RHH5288_R3660
19.9
Effector memory CD8 T-cell nTPM: 22.7
Samples: 4
Max nTPM: 28.7
Min nTPM: 14.2
RHH5203_R3574
28.7
RHH5231_R3603
20.8
RHH5260_R3632
27.1
RHH5289_R3661
14.2
MAIT T-cell nTPM: 15.0
Samples: 4
Max nTPM: 21.1
Min nTPM: 12.2
RHH5233_R3605
12.2
RHH5205_R3576
14.2
RHH5262_R3634
12.3
RHH5297_R3663
21.1
Memory CD4 T-cell TFH nTPM: 18.1
Samples: 4
Max nTPM: 31.7
Min nTPM: 9.3
RHH5300_R3666
19.6
RHH5236_R3608
31.7
RHH5265_R3637
9.3
RHH5208_R3579
11.6
Memory CD4 T-cell Th1 nTPM: 27.7
Samples: 4
Max nTPM: 39.6
Min nTPM: 17.8
RHH5210_R3581
17.8
RHH5302_R3668
39.6
RHH5238_R3610
29.2
RHH5267_R3639
24.1
Memory CD4 T-cell Th1/Th17 nTPM: 21.4
Samples: 4
Max nTPM: 24.9
Min nTPM: 19.4
RHH5303_R3669
24.9
RHH5211_R3582
19.4
RHH5239_R3611
20.7
RHH5268_R3640
20.6
Memory CD4 T-cell Th17 nTPM: 17.8
Samples: 4
Max nTPM: 27.6
Min nTPM: 11.0
RHH5304_R3670
18.9
RHH5212_R3583
27.6
RHH5240_R3612
13.6
RHH5269_R3641
11.0
Memory CD4 T-cell Th2 nTPM: 17.4
Samples: 4
Max nTPM: 20.4
Min nTPM: 15.3
RHH5305_R3671
20.4
RHH5213_R3584
15.3
RHH5241_R3613
16.4
RHH5270_R3642
17.3
Naive CD4 T-cell nTPM: 18.2
Samples: 4
Max nTPM: 27.7
Min nTPM: 11.3
RHH5306_R3672
22.0
RHH5214_R3585
27.7
RHH5242_R3614
11.3
RHH5271_R3643
11.8
Naive CD8 T-cell nTPM: 12.6
Samples: 4
Max nTPM: 14.2
Min nTPM: 10.4
RHH5201_R3572
13.7
RHH5229_R3601
10.4
RHH5258_R3630
11.9
RHH5287_R3659
14.2
Non-Vd2 gdTCR nTPM: 32.6
Samples: 4
Max nTPM: 48.7
Min nTPM: 18.0
RHH5235_R3607
26.5
RHH5264_R3636
37.2
RHH5207_R3578
18.0
RHH5299_R3665
48.7
T-reg nTPM: 23.1
Samples: 4
Max nTPM: 30.9
Min nTPM: 15.9
RHH5301_R3667
30.9
RHH5237_R3609
27.1
RHH5266_R3638
18.6
RHH5209_R3580
15.9
Terminal effector memory CD4 T-cell nTPM: 18.8
Samples: 2
Max nTPM: 20.0
Min nTPM: 17.6
RHH5243_R3615
17.6
RHH5272_R3644
20.0
Terminal effector memory CD8 T-cell nTPM: 40.9
Samples: 4
Max nTPM: 78.6
Min nTPM: 24.4
RHH5232_R3604
24.4
RHH5204_R3575
78.6
RHH5261_R3633
25.4
RHH5296_R3662
35.1
Vd2 gdTCR nTPM: 37.7
Samples: 4
Max nTPM: 60.0
Min nTPM: 19.6
RHH5234_R3606
19.6
RHH5206_R3577
60.0
RHH5263_R3635
21.6
RHH5298_R3664
49.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
