HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:63.8 nTPM
HPA Brain:74.4 nTPM
GTEx:63.8 nTPM
FANTOM5:38.4 Scaled Tags Per Million
Pig:34.9 nTPM
Mouse:76.7 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA056597
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 74.4
Sample id Sample description nTPM
Hippocampus
nTPM: 70.6
1898 Male, age 80, left hemisphere 85.1
1855 Male, age 76, left hemisphere 74.0
2148 Female, age 91, left hemisphere 73.3
2621 Female, age 67, right hemisphere 72.7
2529 Female, age 94, left hemisphere 61.9
1911 Female, age 85, right hemisphere 56.6
Dentate gyrus
nTPM: 68.0
2530 Female, age 94, left hemisphere 78.8
1927 Female, age 91, both hemispheres 74.3
2010 Male, age 76, both hemispheres 69.1
2531 Female, age 67, both hemispheres 67.7
2528 Male, age 74, both hemispheres 62.2
2246 Female, age 85, both hemispheres 56.2
Entorhinal gyrus
nTPM: 74.0
2764 Male, age 80, right hemisphere 83.4
2613 Female, age 94, left hemisphere 83.2
2686 Male, age 75, right hemisphere 74.3
1938 Female, age 85, left hemisphere 71.8
1787 Male, age 76, left hemisphere 69.3
2117 Female, age 91, right hemisphere 61.7
Hippocampus, CA1
nTPM: 69.5
2749 Male, age 80, left hemisphere 90.1
1873 Female, age 85, both hemispheres 75.1
2045 Male, age 76, both hemispheres 64.1
2082 Female, age 91, right hemisphere 60.0
2527 Male, age 74, both hemispheres 58.4
Hippocampus, CA2
nTPM: 68.1
1963 Male, age 80, left hemisphere 88.3
1892 Male, age 76, both hemispheres 84.1
2437 Female, age 94, left hemisphere 69.0
2113 Female, age 91, right hemisphere 58.7
1940 Female, age 85, left hemisphere 56.6
2249 Male, age 74, both hemispheres 52.0
Hippocampus, CA3
nTPM: 69.0
2861 Female, age 67, both hemispheres 87.8
2620 Female, age 94, left hemisphere 74.8
1867 Male, age 76, both hemispheres 67.6
2137 Male, age 80, left hemisphere 67.3
1891 Female, age 85, both hemispheres 58.6
2436 Male, age 74, both hemispheres 58.0
Parahippocampal cortex
nTPM: 65.6
1850 Male, age 80, both hemispheres 75.8
2622 Female, age 67, right hemisphere 74.1
1990 Female, age 91, right hemisphere 66.7
2693 Female, age 94, both hemispheres 66.7
1933 Female, age 85, both hemispheres 66.2
2532 Female, age 72, left hemisphere 65.8
2692 Male, age 74, both hemispheres 64.6
2245 Female, age 91, both hemispheres 62.7
2250 Female, age 67, right hemisphere 58.2
2018 Male, age 76, both hemispheres 55.3
Perirhinal gyrus
nTPM: 74.4
1794 Male, age 80, right hemisphere 84.4
1847 Female, age 91, left hemisphere 82.7
1841 Female, age 85, right hemisphere 74.5
2848 Male, age 76, right hemisphere 65.3
2521 Female, age 94, right hemisphere 64.8
Subiculum
nTPM: 61.4
1977 Female, age 85, both hemispheres 67.6
2619 Male, age 74, both hemispheres 64.3
2438 Female, age 94, left hemisphere 63.3
1901 Male, age 80, both hemispheres 62.2
2729 Female, age 91, right hemisphere 56.7
2042 Male, age 76, both hemispheres 54.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 63.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 63.8
Samples: 197

Max nTPM: 99.8
Min nTPM: 30.8
Std nTPM: 13.8
Median nTPM: 63.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 99.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 99.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 98.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 97.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 95.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 94.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 93.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 92.6
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 90.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 89.7
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 88.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.4
FF:10153-102I9 76 years, female 41.5
FF:10169-103B7 60 years, female 35.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.9
Pig sample Sample description nTPM
Subiculum
nTPM: 30.0
Samples: 4

Max nTPM: 32.9
Min nTPM: 26.1
Sample A Female 32.9
Sample B Female 31.9
Sample C Male 26.1
Sample D Male 29.1
Dorsal hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 41.6
Min nTPM: 27.4
Sample A Female 41.6
Sample B Female 39.5
Sample C Male 27.4
Sample D Male 28.9
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 31.5
Min nTPM: 26.8
Sample A Female 29.6
Sample B Female 31.5
Sample C Male 28.7
Sample D Male 26.8
Ventral hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 42.5
Min nTPM: 26.7
Sample A Female 34.2
Sample B Female 26.7
Sample C Male 42.5
Sample D Male 36.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 76.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.8
Samples: 4

Max nTPM: 87.4
Min nTPM: 63.7
Sample A Male 63.7
Sample B Male 66.2
Sample C Female 73.7
Sample D Female 87.4
Hippocampal formation
nTPM: 76.7
Samples: 4

Max nTPM: 90.8
Min nTPM: 65.0
Sample A Male 69.0
Sample B Male 65.0
Sample C Female 82.0
Sample D Female 90.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
76098296 Antisense, RP_060626_01_E07, Mouse strain C57BL/6J (56 days, male) 9.0

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