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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
14.1
nTPM
Monaco:
112.4
nTPM
Schmiedel:
30.4
TPM
B-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
14.1
HPA sample
nTPM
Memory B-cell nTPM: 1.9
Samples: 6
Max nTPM: 7.9
Min nTPM: 0.0
P10809_1017
1.0
P10809_1025
0.0
P10809_1044
7.9
P10809_1063
0.1
P10809_1092
0.6
P10809_1105
1.5
Naive B-cell nTPM: 14.1
Samples: 6
Max nTPM: 28.5
Min nTPM: 0.1
P10809_1011
28.5
P10809_1029
17.9
P10809_1048
0.1
P10809_1067
10.5
P10809_1091
13.4
P10809_1104
14.4
B-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
112.4
Monaco sample
nTPM
Exhausted memory B-cell nTPM: 20.5
Samples: 4
Max nTPM: 29.6
Min nTPM: 12.5
RHH5310_R3677
23.6
RHH5218_R3590
12.5
RHH5247_R3619
16.4
RHH5276_R3648
29.6
Naive B-cell nTPM: 112.4
Samples: 4
Max nTPM: 134.6
Min nTPM: 82.3
RHH5308_R3675
108.7
RHH5216_R3588
123.8
RHH5245_R3617
134.6
RHH5274_R3646
82.3
Non-switched memory B-cell nTPM: 11.5
Samples: 4
Max nTPM: 20.6
Min nTPM: 7.3
RHH5309_R3676
10.8
RHH5217_R3589
7.3
RHH5246_R3618
20.6
RHH5275_R3647
7.3
Plasmablast nTPM: 5.1
Samples: 4
Max nTPM: 7.7
Min nTPM: 1.4
RHH5312_R3679
7.7
RHH5220_R3592
1.4
RHH5249_R3621
4.7
RHH5278_R3650
6.5
Switched memory B-cell nTPM: 2.3
Samples: 4
Max nTPM: 3.9
Min nTPM: 0.5
RHH5311_R3678
3.9
RHH5219_R3591
0.5
RHH5248_R3620
3.1
RHH5277_R3649
1.8
B-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
