HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:25.9 nTPM
HPA Brain:48.7 nTPM
GTEx:25.9 nTPM
FANTOM5:62.1 Scaled Tags Per Million
Pig:69.4 nTPM
Mouse:38.2 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039402
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.7
Sample id Sample description nTPM
Hippocampus
nTPM: 40.2
2529 Female, age 94, left hemisphere 46.7
1911 Female, age 85, right hemisphere 41.4
1898 Male, age 80, left hemisphere 41.3
2621 Female, age 67, right hemisphere 39.6
1855 Male, age 76, left hemisphere 38.4
2148 Female, age 91, left hemisphere 33.8
Dentate gyrus
nTPM: 42.1
2010 Male, age 76, both hemispheres 50.8
2530 Female, age 94, left hemisphere 50.3
2531 Female, age 67, both hemispheres 40.1
2246 Female, age 85, both hemispheres 39.2
2528 Male, age 74, both hemispheres 36.3
1927 Female, age 91, both hemispheres 36.1
Entorhinal gyrus
nTPM: 41.1
2117 Female, age 91, right hemisphere 55.1
2686 Male, age 75, right hemisphere 40.9
2764 Male, age 80, right hemisphere 40.9
1938 Female, age 85, left hemisphere 38.2
1787 Male, age 76, left hemisphere 36.7
2613 Female, age 94, left hemisphere 35.0
Hippocampus, CA1
nTPM: 38.1
2749 Male, age 80, left hemisphere 39.9
2082 Female, age 91, right hemisphere 39.2
1873 Female, age 85, both hemispheres 38.6
2527 Male, age 74, both hemispheres 38.0
2045 Male, age 76, both hemispheres 34.7
Hippocampus, CA2
nTPM: 42.9
1963 Male, age 80, left hemisphere 53.7
1940 Female, age 85, left hemisphere 41.1
2249 Male, age 74, both hemispheres 41.0
2437 Female, age 94, left hemisphere 40.7
1892 Male, age 76, both hemispheres 40.4
2113 Female, age 91, right hemisphere 40.4
Hippocampus, CA3
nTPM: 35.6
1891 Female, age 85, both hemispheres 55.9
1867 Male, age 76, both hemispheres 39.0
2137 Male, age 80, left hemisphere 33.2
2436 Male, age 74, both hemispheres 31.0
2620 Female, age 94, left hemisphere 27.9
2861 Female, age 67, both hemispheres 26.9
Parahippocampal cortex
nTPM: 38.2
1990 Female, age 91, right hemisphere 47.9
2532 Female, age 72, left hemisphere 45.7
2692 Male, age 74, both hemispheres 44.9
1850 Male, age 80, both hemispheres 40.3
2018 Male, age 76, both hemispheres 38.9
1933 Female, age 85, both hemispheres 38.3
2245 Female, age 91, both hemispheres 35.8
2693 Female, age 94, both hemispheres 34.4
2250 Female, age 67, right hemisphere 29.9
2622 Female, age 67, right hemisphere 26.0
Perirhinal gyrus
nTPM: 33.6
2848 Male, age 76, right hemisphere 39.3
2521 Female, age 94, right hemisphere 34.2
1841 Female, age 85, right hemisphere 31.9
1794 Male, age 80, right hemisphere 31.4
1847 Female, age 91, left hemisphere 31.4
Subiculum
nTPM: 48.7
2438 Female, age 94, left hemisphere 58.3
1901 Male, age 80, both hemispheres 56.1
2042 Male, age 76, both hemispheres 53.2
1977 Female, age 85, both hemispheres 49.5
2619 Male, age 74, both hemispheres 38.0
2729 Female, age 91, right hemisphere 37.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.9
Samples: 197

Max nTPM: 94.7
Min nTPM: 8.9
Std nTPM: 13.7
Median nTPM: 22.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 94.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 76.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 75.7
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 73.4
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 72.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 67.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 61.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 57.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 56.1
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 56.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 55.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.1
FF:10153-102I9 76 years, female 77.5
FF:10169-103B7 60 years, female 46.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.4
Pig sample Sample description nTPM
Subiculum
nTPM: 41.3
Samples: 4

Max nTPM: 48.4
Min nTPM: 37.6
Sample A Female 48.4
Sample B Female 39.3
Sample C Male 37.6
Sample D Male 39.9
Dorsal hippocampus
nTPM: 69.4
Samples: 4

Max nTPM: 94.6
Min nTPM: 45.5
Sample A Female 94.6
Sample B Female 57.0
Sample C Male 80.6
Sample D Male 45.5
Entorhinal cortex
nTPM: 40.3
Samples: 4

Max nTPM: 46.6
Min nTPM: 34.3
Sample A Female 36.3
Sample B Female 46.6
Sample C Male 34.3
Sample D Male 43.8
Ventral hippocampus
nTPM: 50.7
Samples: 4

Max nTPM: 64.7
Min nTPM: 35.9
Sample A Female 61.6
Sample B Female 35.9
Sample C Male 40.5
Sample D Male 64.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 37.5
Min nTPM: 25.5
Sample A Male 37.5
Sample B Male 34.6
Sample C Female 29.2
Sample D Female 25.5
Hippocampal formation
nTPM: 38.2
Samples: 4

Max nTPM: 43.2
Min nTPM: 34.2
Sample A Male 34.2
Sample B Male 37.2
Sample C Female 43.2
Sample D Female 38.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
77790746 Antisense, RP_070208_04_B11, Mouse strain C57BL/6J (56 days, male) 2.4
68843781 Antisense, RP_050217_02_C03, Mouse strain C57BL/6J (56 days, male) 2.0
77280311 Antisense, RP_070116_01_B02, Mouse strain C57BL/6J (56 days, male) 1.6

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