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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
106.5
nTPM
Monaco:
234.1
nTPM
Schmiedel:
229.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
106.5
HPA sample
nTPM
gdT-cell nTPM: 74.4
Samples: 6
Max nTPM: 91.7
Min nTPM: 62.0
P10809_1007
69.9
P10809_1022
83.1
P10809_1041
91.7
P10809_1060
62.0
P10809_1077
62.2
P10809_1098
77.4
MAIT T-cell nTPM: 63.4
Samples: 6
Max nTPM: 78.2
Min nTPM: 54.2
P10809_1006
61.4
P10809_1024
58.7
P10809_1043
61.3
P10809_1062
54.2
P10809_1083
66.7
P10809_1097
78.2
Memory CD4 T-cell nTPM: 63.7
Samples: 6
Max nTPM: 77.1
Min nTPM: 55.1
P10809_1014
60.1
P10809_1026
66.0
P10809_1045
77.1
P10809_1064
55.1
P10809_1086
55.3
P10809_1113
68.7
Memory CD8 T-cell nTPM: 73.9
Samples: 5
Max nTPM: 93.8
Min nTPM: 56.1
P10809_1012
74.4
P10809_1027
72.5
P10809_1046
93.8
P10809_1065
56.1
P10809_1111
72.5
Naive CD4 T-cell nTPM: 48.5
Samples: 6
Max nTPM: 54.9
Min nTPM: 40.9
P10809_1015
46.8
P10809_1030
48.2
P10809_1049
53.9
P10809_1068
40.9
P10809_1085
46.2
P10809_1112
54.9
Naive CD8 T-cell nTPM: 57.1
Samples: 6
Max nTPM: 68.4
Min nTPM: 47.9
P10809_1016
53.1
P10809_1031
47.9
P10809_1050
60.5
P10809_1069
59.0
P10809_1087
53.6
P10809_1110
68.4
T-reg nTPM: 106.5
Samples: 6
Max nTPM: 135.6
Min nTPM: 72.1
P10809_1018
123.0
P10809_1037
72.1
P10809_1056
114.7
P10809_1075
81.3
P10809_1094
135.6
P10809_1106
112.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
234.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 164.0
Samples: 4
Max nTPM: 181.6
Min nTPM: 128.6
RHH5202_R3573
179.2
RHH5230_R3602
181.6
RHH5259_R3631
128.6
RHH5288_R3660
166.6
Effector memory CD8 T-cell nTPM: 234.1
Samples: 4
Max nTPM: 309.4
Min nTPM: 185.8
RHH5203_R3574
309.4
RHH5231_R3603
239.8
RHH5260_R3632
201.4
RHH5289_R3661
185.8
MAIT T-cell nTPM: 176.2
Samples: 4
Max nTPM: 210.0
Min nTPM: 141.4
RHH5233_R3605
169.3
RHH5205_R3576
210.0
RHH5262_R3634
183.9
RHH5297_R3663
141.4
Memory CD4 T-cell TFH nTPM: 177.3
Samples: 4
Max nTPM: 209.1
Min nTPM: 156.3
RHH5300_R3666
157.9
RHH5236_R3608
156.3
RHH5265_R3637
209.1
RHH5208_R3579
185.9
Memory CD4 T-cell Th1 nTPM: 173.4
Samples: 4
Max nTPM: 198.9
Min nTPM: 138.3
RHH5210_R3581
179.1
RHH5302_R3668
177.3
RHH5238_R3610
138.3
RHH5267_R3639
198.9
Memory CD4 T-cell Th1/Th17 nTPM: 157.6
Samples: 4
Max nTPM: 172.6
Min nTPM: 133.2
RHH5303_R3669
169.3
RHH5211_R3582
155.3
RHH5239_R3611
133.2
RHH5268_R3640
172.6
Memory CD4 T-cell Th17 nTPM: 172.8
Samples: 4
Max nTPM: 202.0
Min nTPM: 152.6
RHH5304_R3670
177.6
RHH5212_R3583
159.0
RHH5240_R3612
202.0
RHH5269_R3641
152.6
Memory CD4 T-cell Th2 nTPM: 164.3
Samples: 4
Max nTPM: 188.1
Min nTPM: 136.3
RHH5305_R3671
184.4
RHH5213_R3584
148.3
RHH5241_R3613
136.3
RHH5270_R3642
188.1
Naive CD4 T-cell nTPM: 143.3
Samples: 4
Max nTPM: 158.1
Min nTPM: 129.8
RHH5306_R3672
140.4
RHH5214_R3585
158.1
RHH5242_R3614
144.8
RHH5271_R3643
129.8
Naive CD8 T-cell nTPM: 121.4
Samples: 4
Max nTPM: 148.4
Min nTPM: 84.1
RHH5201_R3572
84.1
RHH5229_R3601
109.4
RHH5258_R3630
143.7
RHH5287_R3659
148.4
Non-Vd2 gdTCR nTPM: 226.0
Samples: 4
Max nTPM: 253.7
Min nTPM: 207.0
RHH5235_R3607
253.7
RHH5264_R3636
208.9
RHH5207_R3578
234.4
RHH5299_R3665
207.0
T-reg nTPM: 169.8
Samples: 4
Max nTPM: 204.1
Min nTPM: 146.1
RHH5301_R3667
164.5
RHH5237_R3609
146.1
RHH5266_R3638
204.1
RHH5209_R3580
164.4
Terminal effector memory CD4 T-cell nTPM: 133.1
Samples: 2
Max nTPM: 142.2
Min nTPM: 123.9
RHH5243_R3615
142.2
RHH5272_R3644
123.9
Terminal effector memory CD8 T-cell nTPM: 200.2
Samples: 4
Max nTPM: 214.8
Min nTPM: 189.3
RHH5232_R3604
193.3
RHH5204_R3575
214.8
RHH5261_R3633
189.3
RHH5296_R3662
203.3
Vd2 gdTCR nTPM: 176.9
Samples: 4
Max nTPM: 202.8
Min nTPM: 156.4
RHH5234_R3606
202.8
RHH5206_R3577
189.3
RHH5263_R3635
158.9
RHH5298_R3664
156.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
