HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:17.3 nTPM
HPA Brain:42.3 nTPM
GTEx:17.3 nTPM
FANTOM5:31.9 Scaled Tags Per Million
Pig:12.7 nTPM
Mouse:3.3 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.3
Sample id Sample description nTPM
Hippocampus
nTPM: 42.3
2148 Female, age 91, left hemisphere 53.8
2529 Female, age 94, left hemisphere 53.8
1898 Male, age 80, left hemisphere 40.8
1855 Male, age 76, left hemisphere 40.6
1911 Female, age 85, right hemisphere 37.5
2621 Female, age 67, right hemisphere 27.3
Dentate gyrus
nTPM: 38.1
2528 Male, age 74, both hemispheres 67.7
2530 Female, age 94, left hemisphere 41.2
2246 Female, age 85, both hemispheres 35.4
2531 Female, age 67, both hemispheres 32.2
2010 Male, age 76, both hemispheres 27.0
1927 Female, age 91, both hemispheres 25.4
Entorhinal gyrus
nTPM: 20.7
2117 Female, age 91, right hemisphere 34.8
1787 Male, age 76, left hemisphere 21.5
2764 Male, age 80, right hemisphere 19.6
2686 Male, age 75, right hemisphere 17.4
1938 Female, age 85, left hemisphere 16.6
2613 Female, age 94, left hemisphere 14.4
Hippocampus, CA1
nTPM: 34.4
2527 Male, age 74, both hemispheres 50.0
1873 Female, age 85, both hemispheres 44.7
2082 Female, age 91, right hemisphere 34.5
2045 Male, age 76, both hemispheres 29.5
2749 Male, age 80, left hemisphere 13.1
Hippocampus, CA2
nTPM: 32.4
2249 Male, age 74, both hemispheres 40.3
2113 Female, age 91, right hemisphere 40.1
1963 Male, age 80, left hemisphere 37.5
2437 Female, age 94, left hemisphere 31.4
1940 Female, age 85, left hemisphere 31.0
1892 Male, age 76, both hemispheres 14.1
Hippocampus, CA3
nTPM: 32.8
2620 Female, age 94, left hemisphere 47.7
2861 Female, age 67, both hemispheres 43.9
1891 Female, age 85, both hemispheres 41.0
2436 Male, age 74, both hemispheres 31.8
1867 Male, age 76, both hemispheres 16.9
2137 Male, age 80, left hemisphere 15.4
Parahippocampal cortex
nTPM: 15.0
2018 Male, age 76, both hemispheres 27.5
2692 Male, age 74, both hemispheres 24.6
1990 Female, age 91, right hemisphere 16.6
2245 Female, age 91, both hemispheres 15.8
2250 Female, age 67, right hemisphere 14.0
1850 Male, age 80, both hemispheres 12.6
1933 Female, age 85, both hemispheres 12.5
2532 Female, age 72, left hemisphere 11.0
2622 Female, age 67, right hemisphere 8.5
2693 Female, age 94, both hemispheres 6.7
Perirhinal gyrus
nTPM: 10.3
1847 Female, age 91, left hemisphere 14.0
2521 Female, age 94, right hemisphere 11.3
2848 Male, age 76, right hemisphere 11.1
1794 Male, age 80, right hemisphere 8.1
1841 Female, age 85, right hemisphere 7.2
Subiculum
nTPM: 32.8
2729 Female, age 91, right hemisphere 63.5
2619 Male, age 74, both hemispheres 31.6
2042 Male, age 76, both hemispheres 28.3
1901 Male, age 80, both hemispheres 25.8
2438 Female, age 94, left hemisphere 25.8
1977 Female, age 85, both hemispheres 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.3
Samples: 197

Max nTPM: 69.3
Min nTPM: 3.6
Std nTPM: 9.5
Median nTPM: 15.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 69.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 49.6
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 43.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 43.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 42.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 40.1
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 39.2
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 39.1
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 38.8
GTEX-1HSKV-0011-R1b-SM-CMKH7 60-69 years, male 36.7
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 35.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.9
FF:10169-103B7 60 years, female 34.2
FF:10153-102I9 76 years, female 29.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 12.7
Pig sample Sample description nTPM
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 13.7
Min nTPM: 10.5
Sample A Female 13.2
Sample B Female 13.5
Sample C Male 13.7
Sample D Male 10.5
Dorsal hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 12.5
Min nTPM: 10.2
Sample A Female 11.1
Sample B Female 10.9
Sample C Male 12.5
Sample D Male 10.2
Entorhinal cortex
nTPM: 9.9
Samples: 4

Max nTPM: 12.0
Min nTPM: 7.6
Sample A Female 10.3
Sample B Female 9.6
Sample C Male 12.0
Sample D Male 7.6
Ventral hippocampus
nTPM: 12.3
Samples: 4

Max nTPM: 17.5
Min nTPM: 9.0
Sample A Female 11.4
Sample B Female 11.2
Sample C Male 17.5
Sample D Male 9.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.1
Samples: 4

Max nTPM: 2.4
Min nTPM: 1.8
Sample A Male 2.4
Sample B Male 2.2
Sample C Female 2.1
Sample D Female 1.8
Hippocampal formation
nTPM: 3.4
Samples: 4

Max nTPM: 3.4
Min nTPM: 3.3
Sample A Male 3.4
Sample B Male 3.3
Sample C Female 3.4
Sample D Female 3.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69818012 Antisense, RP_050510_04_C02, Mouse strain C57BL/6J (56 days, male) 0.0
71212036 Antisense, RP_050816_02_F07, Mouse strain C57BL/6J (56 days, male) 0.0

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