HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:106.8 nTPM
HPA Brain:123.4 nTPM
GTEx:106.8 nTPM
FANTOM5:195.4 Scaled Tags Per Million
Pig:111.4 nTPM
Mouse:120.9 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA060686Antibody CAB013097
Glial cells LowLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.4
Sample id Sample description nTPM
Hippocampus
nTPM: 101.4
1898 Male, age 80, left hemisphere 140.1
2529 Female, age 94, left hemisphere 99.6
1855 Male, age 76, left hemisphere 97.4
1911 Female, age 85, right hemisphere 93.9
2621 Female, age 67, right hemisphere 92.9
2148 Female, age 91, left hemisphere 84.4
Dentate gyrus
nTPM: 105.9
2010 Male, age 76, both hemispheres 122.1
1927 Female, age 91, both hemispheres 117.0
2246 Female, age 85, both hemispheres 112.8
2528 Male, age 74, both hemispheres 103.3
2530 Female, age 94, left hemisphere 97.4
2531 Female, age 67, both hemispheres 83.0
Entorhinal gyrus
nTPM: 91.6
1787 Male, age 76, left hemisphere 109.6
2764 Male, age 80, right hemisphere 106.1
1938 Female, age 85, left hemisphere 105.9
2117 Female, age 91, right hemisphere 87.2
2613 Female, age 94, left hemisphere 71.1
2686 Male, age 75, right hemisphere 69.6
Hippocampus, CA1
nTPM: 115.6
2749 Male, age 80, left hemisphere 157.6
1873 Female, age 85, both hemispheres 116.4
2527 Male, age 74, both hemispheres 113.3
2045 Male, age 76, both hemispheres 101.5
2082 Female, age 91, right hemisphere 88.9
Hippocampus, CA2
nTPM: 113.5
1892 Male, age 76, both hemispheres 135.1
2249 Male, age 74, both hemispheres 131.4
1963 Male, age 80, left hemisphere 121.5
2437 Female, age 94, left hemisphere 101.2
1940 Female, age 85, left hemisphere 97.7
2113 Female, age 91, right hemisphere 94.3
Hippocampus, CA3
nTPM: 102.8
2436 Male, age 74, both hemispheres 132.0
2137 Male, age 80, left hemisphere 126.2
1867 Male, age 76, both hemispheres 111.1
1891 Female, age 85, both hemispheres 94.5
2620 Female, age 94, left hemisphere 83.5
2861 Female, age 67, both hemispheres 69.7
Parahippocampal cortex
nTPM: 98.6
1850 Male, age 80, both hemispheres 126.4
1933 Female, age 85, both hemispheres 110.4
2250 Female, age 67, right hemisphere 108.3
1990 Female, age 91, right hemisphere 107.8
2245 Female, age 91, both hemispheres 106.5
2532 Female, age 72, left hemisphere 102.3
2018 Male, age 76, both hemispheres 101.4
2693 Female, age 94, both hemispheres 91.0
2692 Male, age 74, both hemispheres 67.4
2622 Female, age 67, right hemisphere 64.2
Perirhinal gyrus
nTPM: 123.4
1847 Female, age 91, left hemisphere 155.0
1794 Male, age 80, right hemisphere 133.7
1841 Female, age 85, right hemisphere 122.9
2521 Female, age 94, right hemisphere 106.8
2848 Male, age 76, right hemisphere 98.5
Subiculum
nTPM: 95.5
1977 Female, age 85, both hemispheres 112.9
1901 Male, age 80, both hemispheres 106.6
2438 Female, age 94, left hemisphere 93.0
2729 Female, age 91, right hemisphere 88.3
2619 Male, age 74, both hemispheres 87.2
2042 Male, age 76, both hemispheres 85.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.8
Samples: 197

Max nTPM: 219.6
Min nTPM: 56.5
Std nTPM: 30.5
Median nTPM: 100.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 219.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 187.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 186.5
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 185.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 179.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 175.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 170.1
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 168.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 168.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 165.2
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 164.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 195.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 195.4
FF:10169-103B7 60 years, female 248.2
FF:10153-102I9 76 years, female 142.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 111.4
Pig sample Sample description nTPM
Subiculum
nTPM: 87.6
Samples: 4

Max nTPM: 105.3
Min nTPM: 78.3
Sample A Female 105.3
Sample B Female 81.8
Sample C Male 78.3
Sample D Male 84.8
Dorsal hippocampus
nTPM: 111.4
Samples: 4

Max nTPM: 147.7
Min nTPM: 76.2
Sample A Female 147.7
Sample B Female 114.5
Sample C Male 107.2
Sample D Male 76.2
Entorhinal cortex
nTPM: 82.3
Samples: 4

Max nTPM: 88.4
Min nTPM: 71.7
Sample A Female 87.5
Sample B Female 88.4
Sample C Male 81.7
Sample D Male 71.7
Ventral hippocampus
nTPM: 98.4
Samples: 4

Max nTPM: 111.5
Min nTPM: 73.1
Sample A Female 108.4
Sample B Female 73.1
Sample C Male 100.6
Sample D Male 111.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 120.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 120.9
Samples: 4

Max nTPM: 127.4
Min nTPM: 117.7
Sample A Male 118.1
Sample B Male 117.7
Sample C Female 120.3
Sample D Female 127.4
Hippocampal formation
nTPM: 120.8
Samples: 4

Max nTPM: 137.4
Min nTPM: 113.4
Sample A Male 137.4
Sample B Male 115.3
Sample C Female 116.9
Sample D Female 113.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71724017 Antisense, RP_050921_01_D03, Mouse strain C57BL/6J (56 days, male) 0.0

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