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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
109.8
nTPM
Monaco:
116.3
nTPM
Schmiedel:
73.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
109.8
HPA sample
nTPM
gdT-cell nTPM: 56.9
Samples: 6
Max nTPM: 73.4
Min nTPM: 45.3
P10809_1007
73.4
P10809_1022
68.7
P10809_1041
47.6
P10809_1060
53.7
P10809_1077
52.7
P10809_1098
45.3
MAIT T-cell nTPM: 59.0
Samples: 6
Max nTPM: 81.0
Min nTPM: 37.5
P10809_1006
70.2
P10809_1024
81.0
P10809_1043
37.5
P10809_1062
52.5
P10809_1083
44.3
P10809_1097
68.2
Memory CD4 T-cell nTPM: 85.6
Samples: 6
Max nTPM: 104.6
Min nTPM: 73.2
P10809_1014
104.6
P10809_1026
102.1
P10809_1045
74.3
P10809_1064
82.8
P10809_1086
76.3
P10809_1113
73.2
Memory CD8 T-cell nTPM: 68.6
Samples: 5
Max nTPM: 96.1
Min nTPM: 52.8
P10809_1012
96.1
P10809_1027
79.2
P10809_1046
60.9
P10809_1065
52.8
P10809_1111
54.0
Naive CD4 T-cell nTPM: 79.2
Samples: 6
Max nTPM: 98.2
Min nTPM: 58.7
P10809_1015
84.9
P10809_1030
98.2
P10809_1049
85.6
P10809_1068
58.7
P10809_1085
87.7
P10809_1112
60.0
Naive CD8 T-cell nTPM: 63.8
Samples: 6
Max nTPM: 83.8
Min nTPM: 36.3
P10809_1016
80.3
P10809_1031
68.1
P10809_1050
53.4
P10809_1069
83.8
P10809_1087
61.0
P10809_1110
36.3
T-reg nTPM: 109.9
Samples: 6
Max nTPM: 136.6
Min nTPM: 84.2
P10809_1018
136.6
P10809_1037
121.1
P10809_1056
112.8
P10809_1075
84.2
P10809_1094
100.8
P10809_1106
103.7
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
116.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 69.9
Samples: 4
Max nTPM: 109.4
Min nTPM: 46.0
RHH5202_R3573
72.8
RHH5230_R3602
46.0
RHH5259_R3631
51.5
RHH5288_R3660
109.4
Effector memory CD8 T-cell nTPM: 75.7
Samples: 4
Max nTPM: 85.1
Min nTPM: 68.6
RHH5203_R3574
70.3
RHH5231_R3603
68.6
RHH5260_R3632
85.1
RHH5289_R3661
78.9
MAIT T-cell nTPM: 78.3
Samples: 4
Max nTPM: 111.6
Min nTPM: 62.2
RHH5233_R3605
69.5
RHH5205_R3576
69.9
RHH5262_R3634
62.2
RHH5297_R3663
111.6
Memory CD4 T-cell TFH nTPM: 112.6
Samples: 4
Max nTPM: 133.9
Min nTPM: 86.4
RHH5300_R3666
133.9
RHH5236_R3608
122.1
RHH5265_R3637
86.4
RHH5208_R3579
107.8
Memory CD4 T-cell Th1 nTPM: 112.6
Samples: 4
Max nTPM: 170.0
Min nTPM: 84.5
RHH5210_R3581
99.6
RHH5302_R3668
170.0
RHH5238_R3610
96.3
RHH5267_R3639
84.5
Memory CD4 T-cell Th1/Th17 nTPM: 112.4
Samples: 4
Max nTPM: 163.4
Min nTPM: 91.1
RHH5303_R3669
163.4
RHH5211_R3582
100.3
RHH5239_R3611
91.1
RHH5268_R3640
94.9
Memory CD4 T-cell Th17 nTPM: 106.4
Samples: 4
Max nTPM: 130.7
Min nTPM: 74.1
RHH5304_R3670
116.4
RHH5212_R3583
104.2
RHH5240_R3612
130.7
RHH5269_R3641
74.1
Memory CD4 T-cell Th2 nTPM: 114.5
Samples: 4
Max nTPM: 142.3
Min nTPM: 100.8
RHH5305_R3671
142.3
RHH5213_R3584
100.8
RHH5241_R3613
111.3
RHH5270_R3642
103.7
Naive CD4 T-cell nTPM: 111.8
Samples: 4
Max nTPM: 143.9
Min nTPM: 76.7
RHH5306_R3672
114.7
RHH5214_R3585
143.9
RHH5242_R3614
76.7
RHH5271_R3643
111.8
Naive CD8 T-cell nTPM: 64.3
Samples: 4
Max nTPM: 87.5
Min nTPM: 45.2
RHH5201_R3572
47.4
RHH5229_R3601
45.2
RHH5258_R3630
87.5
RHH5287_R3659
77.2
Non-Vd2 gdTCR nTPM: 91.9
Samples: 4
Max nTPM: 132.0
Min nTPM: 49.1
RHH5235_R3607
49.1
RHH5264_R3636
77.7
RHH5207_R3578
108.6
RHH5299_R3665
132.0
T-reg nTPM: 116.3
Samples: 4
Max nTPM: 133.0
Min nTPM: 97.7
RHH5301_R3667
133.0
RHH5237_R3609
125.0
RHH5266_R3638
97.7
RHH5209_R3580
109.3
Terminal effector memory CD4 T-cell nTPM: 96.5
Samples: 2
Max nTPM: 128.0
Min nTPM: 64.9
RHH5243_R3615
64.9
RHH5272_R3644
128.0
Terminal effector memory CD8 T-cell nTPM: 98.0
Samples: 4
Max nTPM: 125.3
Min nTPM: 73.6
RHH5232_R3604
85.5
RHH5204_R3575
107.7
RHH5261_R3633
73.6
RHH5296_R3662
125.3
Vd2 gdTCR nTPM: 88.6
Samples: 4
Max nTPM: 126.7
Min nTPM: 60.5
RHH5234_R3606
60.5
RHH5206_R3577
126.7
RHH5263_R3635
65.1
RHH5298_R3664
102.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
