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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
39.4
nTPM
Monaco:
20.9
nTPM
Schmiedel:
10.4
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
39.4
HPA sample
nTPM
gdT-cell nTPM: 24.6
Samples: 6
Max nTPM: 32.4
Min nTPM: 16.7
P10809_1007
19.2
P10809_1022
32.4
P10809_1041
16.7
P10809_1060
29.3
P10809_1077
27.3
P10809_1098
22.6
MAIT T-cell nTPM: 17.6
Samples: 6
Max nTPM: 22.9
Min nTPM: 12.4
P10809_1006
14.8
P10809_1024
21.7
P10809_1043
22.9
P10809_1062
18.7
P10809_1083
15.0
P10809_1097
12.4
Memory CD4 T-cell nTPM: 21.3
Samples: 6
Max nTPM: 31.9
Min nTPM: 15.4
P10809_1014
15.4
P10809_1026
31.9
P10809_1045
19.8
P10809_1064
20.2
P10809_1086
20.5
P10809_1113
19.8
Memory CD8 T-cell nTPM: 23.7
Samples: 5
Max nTPM: 43.4
Min nTPM: 12.9
P10809_1012
12.9
P10809_1027
43.4
P10809_1046
24.1
P10809_1065
19.2
P10809_1111
19.0
Naive CD4 T-cell nTPM: 22.4
Samples: 6
Max nTPM: 28.5
Min nTPM: 14.7
P10809_1015
14.7
P10809_1030
26.7
P10809_1049
20.7
P10809_1068
22.4
P10809_1085
28.5
P10809_1112
21.5
Naive CD8 T-cell nTPM: 21.9
Samples: 6
Max nTPM: 32.1
Min nTPM: 16.1
P10809_1016
16.1
P10809_1031
32.1
P10809_1050
19.9
P10809_1069
22.2
P10809_1087
23.1
P10809_1110
17.7
T-reg nTPM: 39.4
Samples: 6
Max nTPM: 65.0
Min nTPM: 28.6
P10809_1018
28.6
P10809_1037
33.2
P10809_1056
65.0
P10809_1075
29.0
P10809_1094
43.1
P10809_1106
37.5
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
20.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 12.5
Samples: 4
Max nTPM: 21.3
Min nTPM: 3.6
RHH5202_R3573
21.3
RHH5230_R3602
3.6
RHH5259_R3631
7.2
RHH5288_R3660
17.8
Effector memory CD8 T-cell nTPM: 10.1
Samples: 4
Max nTPM: 17.9
Min nTPM: 3.1
RHH5203_R3574
9.7
RHH5231_R3603
17.9
RHH5260_R3632
9.6
RHH5289_R3661
3.1
MAIT T-cell nTPM: 15.8
Samples: 4
Max nTPM: 30.7
Min nTPM: 4.3
RHH5233_R3605
12.7
RHH5205_R3576
15.5
RHH5262_R3634
4.3
RHH5297_R3663
30.7
Memory CD4 T-cell TFH nTPM: 14.1
Samples: 4
Max nTPM: 27.3
Min nTPM: 3.4
RHH5300_R3666
9.7
RHH5236_R3608
3.4
RHH5265_R3637
15.8
RHH5208_R3579
27.3
Memory CD4 T-cell Th1 nTPM: 6.9
Samples: 4
Max nTPM: 10.7
Min nTPM: 3.3
RHH5210_R3581
3.3
RHH5302_R3668
10.7
RHH5238_R3610
5.2
RHH5267_R3639
8.5
Memory CD4 T-cell Th1/Th17 nTPM: 10.5
Samples: 4
Max nTPM: 14.2
Min nTPM: 4.5
RHH5303_R3669
12.8
RHH5211_R3582
10.3
RHH5239_R3611
14.2
RHH5268_R3640
4.5
Memory CD4 T-cell Th17 nTPM: 11.4
Samples: 4
Max nTPM: 21.1
Min nTPM: 2.7
RHH5304_R3670
13.5
RHH5212_R3583
21.1
RHH5240_R3612
2.7
RHH5269_R3641
8.3
Memory CD4 T-cell Th2 nTPM: 14.5
Samples: 4
Max nTPM: 20.9
Min nTPM: 11.4
RHH5305_R3671
20.9
RHH5213_R3584
12.1
RHH5241_R3613
13.4
RHH5270_R3642
11.4
Naive CD4 T-cell nTPM: 13.7
Samples: 4
Max nTPM: 20.4
Min nTPM: 1.4
RHH5306_R3672
20.4
RHH5214_R3585
20.4
RHH5242_R3614
1.4
RHH5271_R3643
12.6
Naive CD8 T-cell nTPM: 12.0
Samples: 4
Max nTPM: 19.2
Min nTPM: 6.7
RHH5201_R3572
11.0
RHH5229_R3601
6.7
RHH5258_R3630
10.9
RHH5287_R3659
19.2
Non-Vd2 gdTCR nTPM: 10.2
Samples: 4
Max nTPM: 20.7
Min nTPM: 0.6
RHH5235_R3607
0.6
RHH5264_R3636
15.0
RHH5207_R3578
4.4
RHH5299_R3665
20.7
T-reg nTPM: 9.1
Samples: 4
Max nTPM: 14.3
Min nTPM: 7.1
RHH5301_R3667
14.3
RHH5237_R3609
7.5
RHH5266_R3638
7.4
RHH5209_R3580
7.1
Terminal effector memory CD4 T-cell nTPM: 9.7
Samples: 2
Max nTPM: 18.3
Min nTPM: 1.0
RHH5243_R3615
1.0
RHH5272_R3644
18.3
Terminal effector memory CD8 T-cell nTPM: 14.9
Samples: 4
Max nTPM: 19.1
Min nTPM: 6.0
RHH5232_R3604
16.1
RHH5204_R3575
19.1
RHH5261_R3633
6.0
RHH5296_R3662
18.3
Vd2 gdTCR nTPM: 20.9
Samples: 4
Max nTPM: 32.8
Min nTPM: 4.3
RHH5234_R3606
26.9
RHH5206_R3577
32.8
RHH5263_R3635
4.3
RHH5298_R3664
19.7
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
