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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
53.1
nTPM
Monaco:
49.9
nTPM
Schmiedel:
501.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
53.1
HPA sample
nTPM
gdT-cell nTPM: 35.6
Samples: 6
Max nTPM: 41.9
Min nTPM: 28.8
P10809_1007
41.9
P10809_1022
30.8
P10809_1041
32.3
P10809_1060
28.8
P10809_1077
38.7
P10809_1098
41.3
MAIT T-cell nTPM: 40.9
Samples: 6
Max nTPM: 49.3
Min nTPM: 34.2
P10809_1006
49.3
P10809_1024
35.0
P10809_1043
34.2
P10809_1062
35.4
P10809_1083
48.0
P10809_1097
43.2
Memory CD4 T-cell nTPM: 46.0
Samples: 6
Max nTPM: 54.4
Min nTPM: 39.2
P10809_1014
48.2
P10809_1026
52.0
P10809_1045
41.3
P10809_1064
54.4
P10809_1086
41.0
P10809_1113
39.2
Memory CD8 T-cell nTPM: 43.7
Samples: 5
Max nTPM: 54.1
Min nTPM: 32.9
P10809_1012
53.6
P10809_1027
35.8
P10809_1046
32.9
P10809_1065
42.2
P10809_1111
54.1
Naive CD4 T-cell nTPM: 44.2
Samples: 6
Max nTPM: 52.1
Min nTPM: 35.3
P10809_1015
51.8
P10809_1030
39.3
P10809_1049
35.3
P10809_1068
50.1
P10809_1085
52.1
P10809_1112
36.5
Naive CD8 T-cell nTPM: 47.6
Samples: 6
Max nTPM: 54.4
Min nTPM: 40.9
P10809_1016
51.9
P10809_1031
54.4
P10809_1050
40.9
P10809_1069
51.2
P10809_1087
42.3
P10809_1110
45.1
T-reg nTPM: 53.1
Samples: 6
Max nTPM: 64.3
Min nTPM: 35.5
P10809_1018
55.1
P10809_1037
42.5
P10809_1056
64.3
P10809_1075
57.5
P10809_1094
35.5
P10809_1106
63.6
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
49.9
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 31.3
Samples: 4
Max nTPM: 39.1
Min nTPM: 26.4
RHH5202_R3573
26.4
RHH5230_R3602
39.1
RHH5259_R3631
28.2
RHH5288_R3660
31.3
Effector memory CD8 T-cell nTPM: 32.8
Samples: 4
Max nTPM: 45.1
Min nTPM: 25.3
RHH5203_R3574
31.3
RHH5231_R3603
29.4
RHH5260_R3632
45.1
RHH5289_R3661
25.3
MAIT T-cell nTPM: 44.8
Samples: 4
Max nTPM: 54.0
Min nTPM: 39.6
RHH5233_R3605
40.7
RHH5205_R3576
54.0
RHH5262_R3634
44.9
RHH5297_R3663
39.6
Memory CD4 T-cell TFH nTPM: 30.1
Samples: 4
Max nTPM: 36.7
Min nTPM: 25.3
RHH5300_R3666
26.4
RHH5236_R3608
36.7
RHH5265_R3637
32.0
RHH5208_R3579
25.3
Memory CD4 T-cell Th1 nTPM: 32.3
Samples: 4
Max nTPM: 38.3
Min nTPM: 23.7
RHH5210_R3581
23.7
RHH5302_R3668
38.3
RHH5238_R3610
31.9
RHH5267_R3639
35.1
Memory CD4 T-cell Th1/Th17 nTPM: 38.9
Samples: 4
Max nTPM: 64.4
Min nTPM: 22.6
RHH5303_R3669
22.6
RHH5211_R3582
64.4
RHH5239_R3611
29.2
RHH5268_R3640
39.4
Memory CD4 T-cell Th17 nTPM: 42.8
Samples: 4
Max nTPM: 51.6
Min nTPM: 35.1
RHH5304_R3670
37.2
RHH5212_R3583
47.3
RHH5240_R3612
51.6
RHH5269_R3641
35.1
Memory CD4 T-cell Th2 nTPM: 49.9
Samples: 4
Max nTPM: 58.3
Min nTPM: 42.6
RHH5305_R3671
58.3
RHH5213_R3584
54.1
RHH5241_R3613
42.6
RHH5270_R3642
44.6
Naive CD4 T-cell nTPM: 33.6
Samples: 4
Max nTPM: 42.9
Min nTPM: 21.3
RHH5306_R3672
33.6
RHH5214_R3585
21.3
RHH5242_R3614
36.7
RHH5271_R3643
42.9
Naive CD8 T-cell nTPM: 29.7
Samples: 4
Max nTPM: 40.2
Min nTPM: 20.2
RHH5201_R3572
20.2
RHH5229_R3601
28.3
RHH5258_R3630
40.2
RHH5287_R3659
30.0
Non-Vd2 gdTCR nTPM: 36.5
Samples: 4
Max nTPM: 46.4
Min nTPM: 21.0
RHH5235_R3607
35.9
RHH5264_R3636
46.4
RHH5207_R3578
42.5
RHH5299_R3665
21.0
T-reg nTPM: 37.4
Samples: 4
Max nTPM: 46.1
Min nTPM: 24.1
RHH5301_R3667
24.1
RHH5237_R3609
46.1
RHH5266_R3638
42.4
RHH5209_R3580
36.9
Terminal effector memory CD4 T-cell nTPM: 33.8
Samples: 2
Max nTPM: 37.7
Min nTPM: 29.9
RHH5243_R3615
29.9
RHH5272_R3644
37.7
Terminal effector memory CD8 T-cell nTPM: 35.0
Samples: 4
Max nTPM: 49.3
Min nTPM: 18.5
RHH5232_R3604
42.9
RHH5204_R3575
29.2
RHH5261_R3633
49.3
RHH5296_R3662
18.5
Vd2 gdTCR nTPM: 37.2
Samples: 4
Max nTPM: 49.3
Min nTPM: 25.6
RHH5234_R3606
25.6
RHH5206_R3577
42.5
RHH5263_R3635
49.3
RHH5298_R3664
31.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
