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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
46.7
nTPM
Monaco:
102.6
nTPM
Schmiedel:
60.9
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
46.7
HPA sample
nTPM
gdT-cell nTPM: 21.9
Samples: 6
Max nTPM: 27.2
Min nTPM: 14.4
P10809_1007
27.2
P10809_1022
24.2
P10809_1041
21.5
P10809_1060
14.4
P10809_1077
24.8
P10809_1098
19.2
MAIT T-cell nTPM: 36.8
Samples: 6
Max nTPM: 49.9
Min nTPM: 23.2
P10809_1006
48.1
P10809_1024
49.9
P10809_1043
30.3
P10809_1062
23.2
P10809_1083
27.5
P10809_1097
41.8
Memory CD4 T-cell nTPM: 35.3
Samples: 6
Max nTPM: 51.6
Min nTPM: 19.6
P10809_1014
51.6
P10809_1026
37.4
P10809_1045
36.0
P10809_1064
19.6
P10809_1086
30.9
P10809_1113
36.4
Memory CD8 T-cell nTPM: 28.8
Samples: 5
Max nTPM: 35.4
Min nTPM: 20.3
P10809_1012
35.4
P10809_1027
28.5
P10809_1046
24.8
P10809_1065
20.3
P10809_1111
34.9
Naive CD4 T-cell nTPM: 46.8
Samples: 6
Max nTPM: 73.3
Min nTPM: 31.1
P10809_1015
73.3
P10809_1030
57.5
P10809_1049
44.1
P10809_1068
31.1
P10809_1085
33.9
P10809_1112
40.6
Naive CD8 T-cell nTPM: 36.3
Samples: 6
Max nTPM: 62.0
Min nTPM: 22.9
P10809_1016
62.0
P10809_1031
29.5
P10809_1050
41.7
P10809_1069
22.9
P10809_1087
24.1
P10809_1110
37.4
T-reg nTPM: 44.3
Samples: 6
Max nTPM: 60.8
Min nTPM: 31.9
P10809_1018
43.2
P10809_1037
55.6
P10809_1056
31.9
P10809_1075
33.0
P10809_1094
60.8
P10809_1106
41.1
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
102.6
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 57.7
Samples: 4
Max nTPM: 63.2
Min nTPM: 47.9
RHH5202_R3573
61.3
RHH5230_R3602
47.9
RHH5259_R3631
58.5
RHH5288_R3660
63.2
Effector memory CD8 T-cell nTPM: 62.2
Samples: 4
Max nTPM: 71.2
Min nTPM: 48.8
RHH5203_R3574
57.5
RHH5231_R3603
71.1
RHH5260_R3632
71.2
RHH5289_R3661
48.8
MAIT T-cell nTPM: 66.6
Samples: 4
Max nTPM: 80.6
Min nTPM: 55.6
RHH5233_R3605
80.6
RHH5205_R3576
71.4
RHH5262_R3634
55.6
RHH5297_R3663
58.6
Memory CD4 T-cell TFH nTPM: 76.1
Samples: 4
Max nTPM: 90.0
Min nTPM: 65.2
RHH5300_R3666
65.2
RHH5236_R3608
90.0
RHH5265_R3637
70.2
RHH5208_R3579
78.9
Memory CD4 T-cell Th1 nTPM: 62.6
Samples: 4
Max nTPM: 72.2
Min nTPM: 46.3
RHH5210_R3581
67.5
RHH5302_R3668
64.2
RHH5238_R3610
46.3
RHH5267_R3639
72.2
Memory CD4 T-cell Th1/Th17 nTPM: 60.8
Samples: 4
Max nTPM: 72.2
Min nTPM: 54.2
RHH5303_R3669
72.2
RHH5211_R3582
57.6
RHH5239_R3611
59.2
RHH5268_R3640
54.2
Memory CD4 T-cell Th17 nTPM: 76.5
Samples: 4
Max nTPM: 94.1
Min nTPM: 64.0
RHH5304_R3670
76.7
RHH5212_R3583
64.0
RHH5240_R3612
94.1
RHH5269_R3641
71.1
Memory CD4 T-cell Th2 nTPM: 78.9
Samples: 4
Max nTPM: 92.5
Min nTPM: 72.7
RHH5305_R3671
74.4
RHH5213_R3584
72.7
RHH5241_R3613
92.5
RHH5270_R3642
76.0
Naive CD4 T-cell nTPM: 95.5
Samples: 4
Max nTPM: 120.3
Min nTPM: 70.4
RHH5306_R3672
76.2
RHH5214_R3585
115.0
RHH5242_R3614
70.4
RHH5271_R3643
120.3
Naive CD8 T-cell nTPM: 102.6
Samples: 4
Max nTPM: 129.0
Min nTPM: 75.9
RHH5201_R3572
103.0
RHH5229_R3601
75.9
RHH5258_R3630
102.3
RHH5287_R3659
129.0
Non-Vd2 gdTCR nTPM: 39.0
Samples: 4
Max nTPM: 46.2
Min nTPM: 29.7
RHH5235_R3607
46.2
RHH5264_R3636
40.5
RHH5207_R3578
29.7
RHH5299_R3665
39.5
T-reg nTPM: 84.3
Samples: 4
Max nTPM: 93.1
Min nTPM: 72.4
RHH5301_R3667
72.4
RHH5237_R3609
92.1
RHH5266_R3638
79.7
RHH5209_R3580
93.1
Terminal effector memory CD4 T-cell nTPM: 64.1
Samples: 2
Max nTPM: 67.1
Min nTPM: 61.1
RHH5243_R3615
61.1
RHH5272_R3644
67.1
Terminal effector memory CD8 T-cell nTPM: 49.2
Samples: 4
Max nTPM: 55.4
Min nTPM: 43.2
RHH5232_R3604
55.4
RHH5204_R3575
47.6
RHH5261_R3633
50.4
RHH5296_R3662
43.2
Vd2 gdTCR nTPM: 65.4
Samples: 4
Max nTPM: 93.5
Min nTPM: 42.9
RHH5234_R3606
93.5
RHH5206_R3577
42.9
RHH5263_R3635
74.2
RHH5298_R3664
51.1
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
