HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:91.7 nTPM
HPA Brain:95.2 nTPM
GTEx:91.7 nTPM
FANTOM5:161.2 Scaled Tags Per Million
Pig:33.4 nTPM
Mouse:253.9 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001550Antibody CAB010102
Glial cells MediumHigh
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 95.2
Sample id Sample description nTPM
Hippocampus
nTPM: 61.1
1855 Male, age 76, left hemisphere 74.0
2529 Female, age 94, left hemisphere 68.0
1898 Male, age 80, left hemisphere 65.4
1911 Female, age 85, right hemisphere 60.5
2621 Female, age 67, right hemisphere 51.0
2148 Female, age 91, left hemisphere 47.4
Dentate gyrus
nTPM: 54.4
2010 Male, age 76, both hemispheres 72.4
2530 Female, age 94, left hemisphere 69.6
2528 Male, age 74, both hemispheres 56.3
2246 Female, age 85, both hemispheres 47.5
1927 Female, age 91, both hemispheres 43.5
2531 Female, age 67, both hemispheres 37.1
Entorhinal gyrus
nTPM: 54.2
2117 Female, age 91, right hemisphere 98.4
1787 Male, age 76, left hemisphere 57.8
2764 Male, age 80, right hemisphere 52.3
1938 Female, age 85, left hemisphere 50.1
2613 Female, age 94, left hemisphere 33.7
2686 Male, age 75, right hemisphere 33.1
Hippocampus, CA1
nTPM: 53.9
2527 Male, age 74, both hemispheres 60.5
2749 Male, age 80, left hemisphere 55.0
2045 Male, age 76, both hemispheres 54.0
1873 Female, age 85, both hemispheres 53.1
2082 Female, age 91, right hemisphere 47.2
Hippocampus, CA2
nTPM: 77.9
2249 Male, age 74, both hemispheres 122.9
1963 Male, age 80, left hemisphere 98.9
1940 Female, age 85, left hemisphere 71.3
1892 Male, age 76, both hemispheres 58.9
2113 Female, age 91, right hemisphere 58.3
2437 Female, age 94, left hemisphere 57.3
Hippocampus, CA3
nTPM: 95.2
2436 Male, age 74, both hemispheres 298.2
1867 Male, age 76, both hemispheres 97.5
1891 Female, age 85, both hemispheres 76.5
2137 Male, age 80, left hemisphere 51.4
2861 Female, age 67, both hemispheres 25.9
2620 Female, age 94, left hemisphere 21.6
Parahippocampal cortex
nTPM: 48.9
2018 Male, age 76, both hemispheres 84.7
1990 Female, age 91, right hemisphere 57.2
1850 Male, age 80, both hemispheres 54.0
2692 Male, age 74, both hemispheres 52.6
1933 Female, age 85, both hemispheres 52.5
2532 Female, age 72, left hemisphere 45.9
2250 Female, age 67, right hemisphere 41.9
2245 Female, age 91, both hemispheres 37.3
2693 Female, age 94, both hemispheres 36.9
2622 Female, age 67, right hemisphere 26.2
Perirhinal gyrus
nTPM: 37.9
2848 Male, age 76, right hemisphere 42.8
1794 Male, age 80, right hemisphere 38.1
1847 Female, age 91, left hemisphere 37.6
2521 Female, age 94, right hemisphere 37.5
1841 Female, age 85, right hemisphere 33.7
Subiculum
nTPM: 67.2
2042 Male, age 76, both hemispheres 82.6
1901 Male, age 80, both hemispheres 82.1
2729 Female, age 91, right hemisphere 61.7
1977 Female, age 85, both hemispheres 59.9
2619 Male, age 74, both hemispheres 59.4
2438 Female, age 94, left hemisphere 57.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 91.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 91.7
Samples: 197

Max nTPM: 252.3
Min nTPM: 20.8
Std nTPM: 46.4
Median nTPM: 76.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 252.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 222.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 217.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 213.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 209.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 209.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 206.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 199.0
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 195.8
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 192.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 189.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.2
FF:10153-102I9 76 years, female 241.4
FF:10169-103B7 60 years, female 81.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.4
Pig sample Sample description nTPM
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 31.6
Min nTPM: 15.8
Sample A Female 31.6
Sample B Female 29.0
Sample C Male 18.3
Sample D Male 15.8
Dorsal hippocampus
nTPM: 33.4
Samples: 4

Max nTPM: 39.5
Min nTPM: 19.2
Sample A Female 39.5
Sample B Female 37.7
Sample C Male 37.3
Sample D Male 19.2
Entorhinal cortex
nTPM: 30.9
Samples: 4

Max nTPM: 55.7
Min nTPM: 20.5
Sample A Female 21.7
Sample B Female 55.7
Sample C Male 20.5
Sample D Male 25.8
Ventral hippocampus
nTPM: 32.6
Samples: 4

Max nTPM: 39.7
Min nTPM: 28.0
Sample A Female 30.0
Sample B Female 39.7
Sample C Male 32.5
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 253.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 173.4
Samples: 4

Max nTPM: 206.0
Min nTPM: 130.1
Sample A Male 206.0
Sample B Male 175.8
Sample C Female 181.6
Sample D Female 130.1
Hippocampal formation
nTPM: 253.9
Samples: 4

Max nTPM: 265.1
Min nTPM: 242.7
Sample A Male 244.2
Sample B Male 242.7
Sample C Female 263.4
Sample D Female 265.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69014434 Antisense, RP_050310_01_B02, Mouse strain C57BL/6J (56 days, male) 7.6
72103831 Antisense, RP_051017_03_D11, Mouse strain C57BL/6J (56 days, male) 7.4

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