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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
27.6
nTPM
Monaco:
67.1
nTPM
Schmiedel:
28.5
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
27.6
HPA sample
nTPM
gdT-cell nTPM: 27.4
Samples: 6
Max nTPM: 45.6
Min nTPM: 12.1
P10809_1007
29.9
P10809_1022
45.6
P10809_1041
24.1
P10809_1060
18.4
P10809_1077
34.0
P10809_1098
12.1
MAIT T-cell nTPM: 27.6
Samples: 6
Max nTPM: 40.0
Min nTPM: 9.6
P10809_1006
29.0
P10809_1024
40.0
P10809_1043
35.7
P10809_1062
28.7
P10809_1083
9.6
P10809_1097
22.8
Memory CD4 T-cell nTPM: 20.3
Samples: 6
Max nTPM: 25.2
Min nTPM: 13.3
P10809_1014
23.1
P10809_1026
25.2
P10809_1045
23.6
P10809_1064
16.5
P10809_1086
20.1
P10809_1113
13.3
Memory CD8 T-cell nTPM: 24.1
Samples: 5
Max nTPM: 27.4
Min nTPM: 17.8
P10809_1012
27.3
P10809_1027
27.0
P10809_1046
27.4
P10809_1065
20.8
P10809_1111
17.8
Naive CD4 T-cell nTPM: 17.6
Samples: 6
Max nTPM: 26.4
Min nTPM: 9.8
P10809_1015
21.5
P10809_1030
26.4
P10809_1049
15.3
P10809_1068
15.8
P10809_1085
16.8
P10809_1112
9.8
Naive CD8 T-cell nTPM: 24.7
Samples: 6
Max nTPM: 36.2
Min nTPM: 13.9
P10809_1016
23.7
P10809_1031
36.2
P10809_1050
26.3
P10809_1069
21.8
P10809_1087
26.1
P10809_1110
13.9
T-reg nTPM: 22.3
Samples: 6
Max nTPM: 44.1
Min nTPM: 10.0
P10809_1018
26.0
P10809_1037
18.3
P10809_1056
16.1
P10809_1075
10.0
P10809_1094
44.1
P10809_1106
19.0
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
67.1
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 38.2
Samples: 4
Max nTPM: 54.4
Min nTPM: 28.6
RHH5202_R3573
37.3
RHH5230_R3602
54.4
RHH5259_R3631
32.6
RHH5288_R3660
28.6
Effector memory CD8 T-cell nTPM: 43.1
Samples: 4
Max nTPM: 57.9
Min nTPM: 33.5
RHH5203_R3574
36.0
RHH5231_R3603
57.9
RHH5260_R3632
33.5
RHH5289_R3661
44.8
MAIT T-cell nTPM: 44.5
Samples: 4
Max nTPM: 47.2
Min nTPM: 39.9
RHH5233_R3605
47.2
RHH5205_R3576
46.3
RHH5262_R3634
44.6
RHH5297_R3663
39.9
Memory CD4 T-cell TFH nTPM: 37.8
Samples: 4
Max nTPM: 41.8
Min nTPM: 28.5
RHH5300_R3666
28.5
RHH5236_R3608
40.9
RHH5265_R3637
41.8
RHH5208_R3579
40.0
Memory CD4 T-cell Th1 nTPM: 27.5
Samples: 4
Max nTPM: 42.3
Min nTPM: 20.1
RHH5210_R3581
42.3
RHH5302_R3668
20.1
RHH5238_R3610
23.7
RHH5267_R3639
23.7
Memory CD4 T-cell Th1/Th17 nTPM: 44.3
Samples: 4
Max nTPM: 56.6
Min nTPM: 34.3
RHH5303_R3669
47.8
RHH5211_R3582
34.3
RHH5239_R3611
56.6
RHH5268_R3640
38.5
Memory CD4 T-cell Th17 nTPM: 41.7
Samples: 4
Max nTPM: 52.5
Min nTPM: 34.3
RHH5304_R3670
44.7
RHH5212_R3583
34.3
RHH5240_R3612
52.5
RHH5269_R3641
35.2
Memory CD4 T-cell Th2 nTPM: 40.1
Samples: 4
Max nTPM: 46.7
Min nTPM: 32.3
RHH5305_R3671
32.3
RHH5213_R3584
42.6
RHH5241_R3613
46.7
RHH5270_R3642
38.7
Naive CD4 T-cell nTPM: 40.7
Samples: 4
Max nTPM: 74.2
Min nTPM: 21.6
RHH5306_R3672
21.6
RHH5214_R3585
43.2
RHH5242_R3614
74.2
RHH5271_R3643
23.6
Naive CD8 T-cell nTPM: 39.8
Samples: 4
Max nTPM: 61.1
Min nTPM: 27.2
RHH5201_R3572
42.2
RHH5229_R3601
61.1
RHH5258_R3630
28.8
RHH5287_R3659
27.2
Non-Vd2 gdTCR nTPM: 67.1
Samples: 4
Max nTPM: 94.5
Min nTPM: 46.5
RHH5235_R3607
70.2
RHH5264_R3636
57.0
RHH5207_R3578
94.5
RHH5299_R3665
46.5
T-reg nTPM: 27.5
Samples: 4
Max nTPM: 35.2
Min nTPM: 19.4
RHH5301_R3667
19.4
RHH5237_R3609
34.1
RHH5266_R3638
21.4
RHH5209_R3580
35.2
Terminal effector memory CD4 T-cell nTPM: 56.8
Samples: 2
Max nTPM: 77.9
Min nTPM: 35.7
RHH5243_R3615
77.9
RHH5272_R3644
35.7
Terminal effector memory CD8 T-cell nTPM: 53.6
Samples: 4
Max nTPM: 69.2
Min nTPM: 39.1
RHH5232_R3604
69.2
RHH5204_R3575
66.4
RHH5261_R3633
39.1
RHH5296_R3662
39.7
Vd2 gdTCR nTPM: 41.6
Samples: 4
Max nTPM: 63.4
Min nTPM: 21.4
RHH5234_R3606
44.7
RHH5206_R3577
63.4
RHH5263_R3635
37.0
RHH5298_R3664
21.4
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
