HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:4.3 nTPM
HPA Brain:34.0 nTPM
GTEx:4.3 nTPM
FANTOM5:38.1 Scaled Tags Per Million
Pig:38.7 nTPM
Mouse:71.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045161
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.0
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
2621 Female, age 67, right hemisphere 29.7
2148 Female, age 91, left hemisphere 28.6
1855 Male, age 76, left hemisphere 28.4
1911 Female, age 85, right hemisphere 27.9
1898 Male, age 80, left hemisphere 27.5
2529 Female, age 94, left hemisphere 22.3
Dentate gyrus
nTPM: 31.0
1927 Female, age 91, both hemispheres 36.7
2531 Female, age 67, both hemispheres 34.3
2246 Female, age 85, both hemispheres 32.7
2528 Male, age 74, both hemispheres 28.7
2010 Male, age 76, both hemispheres 28.5
2530 Female, age 94, left hemisphere 24.8
Entorhinal gyrus
nTPM: 28.9
1938 Female, age 85, left hemisphere 35.4
2613 Female, age 94, left hemisphere 28.9
1787 Male, age 76, left hemisphere 28.8
2686 Male, age 75, right hemisphere 28.4
2764 Male, age 80, right hemisphere 27.6
2117 Female, age 91, right hemisphere 24.3
Hippocampus, CA1
nTPM: 32.8
2749 Male, age 80, left hemisphere 44.6
2045 Male, age 76, both hemispheres 30.6
1873 Female, age 85, both hemispheres 29.9
2527 Male, age 74, both hemispheres 29.8
2082 Female, age 91, right hemisphere 29.3
Hippocampus, CA2
nTPM: 28.8
1892 Male, age 76, both hemispheres 32.5
1963 Male, age 80, left hemisphere 30.7
2113 Female, age 91, right hemisphere 29.3
2249 Male, age 74, both hemispheres 28.2
1940 Female, age 85, left hemisphere 27.1
2437 Female, age 94, left hemisphere 24.9
Hippocampus, CA3
nTPM: 32.2
2137 Male, age 80, left hemisphere 42.2
2620 Female, age 94, left hemisphere 35.5
2861 Female, age 67, both hemispheres 31.4
1891 Female, age 85, both hemispheres 28.6
1867 Male, age 76, both hemispheres 27.9
2436 Male, age 74, both hemispheres 27.7
Parahippocampal cortex
nTPM: 30.9
1850 Male, age 80, both hemispheres 36.2
2693 Female, age 94, both hemispheres 34.3
2532 Female, age 72, left hemisphere 34.2
2245 Female, age 91, both hemispheres 31.0
1933 Female, age 85, both hemispheres 30.6
2250 Female, age 67, right hemisphere 30.6
1990 Female, age 91, right hemisphere 29.8
2692 Male, age 74, both hemispheres 28.8
2622 Female, age 67, right hemisphere 28.1
2018 Male, age 76, both hemispheres 25.4
Perirhinal gyrus
nTPM: 34.0
2521 Female, age 94, right hemisphere 35.3
1841 Female, age 85, right hemisphere 34.6
1794 Male, age 80, right hemisphere 34.3
2848 Male, age 76, right hemisphere 33.2
1847 Female, age 91, left hemisphere 32.5
Subiculum
nTPM: 28.5
1977 Female, age 85, both hemispheres 31.5
2729 Female, age 91, right hemisphere 29.7
1901 Male, age 80, both hemispheres 29.0
2438 Female, age 94, left hemisphere 28.0
2042 Male, age 76, both hemispheres 26.3
2619 Male, age 74, both hemispheres 26.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.3
Samples: 197

Max nTPM: 9.0
Min nTPM: 2.0
Std nTPM: 1.4
Median nTPM: 4.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 9.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 8.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 8.0
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 8.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 7.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 7.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 7.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 7.6
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 7.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 7.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 7.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.1
FF:10169-103B7 60 years, female 52.9
FF:10153-102I9 76 years, female 23.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 38.7
Pig sample Sample description nTPM
Subiculum
nTPM: 33.6
Samples: 4

Max nTPM: 36.0
Min nTPM: 29.8
Sample A Female 29.8
Sample B Female 33.2
Sample C Male 36.0
Sample D Male 35.5
Dorsal hippocampus
nTPM: 36.9
Samples: 4

Max nTPM: 38.0
Min nTPM: 35.6
Sample A Female 36.2
Sample B Female 38.0
Sample C Male 35.6
Sample D Male 37.8
Entorhinal cortex
nTPM: 38.7
Samples: 4

Max nTPM: 38.9
Min nTPM: 38.6
Sample A Female 38.6
Sample B Female 38.7
Sample C Male 38.6
Sample D Male 38.9
Ventral hippocampus
nTPM: 33.6
Samples: 4

Max nTPM: 37.1
Min nTPM: 25.5
Sample A Female 34.8
Sample B Female 37.1
Sample C Male 25.5
Sample D Male 37.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 71.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.5
Samples: 4

Max nTPM: 66.1
Min nTPM: 53.9
Sample A Male 53.9
Sample B Male 61.7
Sample C Female 64.4
Sample D Female 66.1
Hippocampal formation
nTPM: 71.4
Samples: 4

Max nTPM: 77.1
Min nTPM: 65.0
Sample A Male 77.1
Sample B Male 69.9
Sample C Female 73.5
Sample D Female 65.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70429136 Antisense, RP_050614_01_A11, Mouse strain C57BL/6J (56 days, male) 0.1
71211389 Antisense, RP_050816_01_E02, Mouse strain C57BL/6J (56 days, male) 0.0

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