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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
118.1
nTPM
Monaco:
79.3
nTPM
Schmiedel:
35.8
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
118.1
HPA sample
nTPM
gdT-cell nTPM: 88.2
Samples: 6
Max nTPM: 113.1
Min nTPM: 38.8
P10809_1007
76.8
P10809_1022
89.9
P10809_1041
113.1
P10809_1060
38.8
P10809_1077
109.5
P10809_1098
100.9
MAIT T-cell nTPM: 81.8
Samples: 6
Max nTPM: 117.5
Min nTPM: 47.4
P10809_1006
66.3
P10809_1024
47.4
P10809_1043
98.3
P10809_1062
64.0
P10809_1083
117.5
P10809_1097
97.2
Memory CD4 T-cell nTPM: 90.4
Samples: 6
Max nTPM: 126.9
Min nTPM: 42.2
P10809_1014
83.0
P10809_1026
105.3
P10809_1045
95.4
P10809_1064
126.9
P10809_1086
89.3
P10809_1113
42.2
Memory CD8 T-cell nTPM: 101.2
Samples: 5
Max nTPM: 131.6
Min nTPM: 84.5
P10809_1012
84.8
P10809_1027
84.5
P10809_1046
89.3
P10809_1065
131.6
P10809_1111
115.9
Naive CD4 T-cell nTPM: 92.4
Samples: 6
Max nTPM: 108.1
Min nTPM: 68.5
P10809_1015
68.5
P10809_1030
100.1
P10809_1049
95.9
P10809_1068
106.5
P10809_1085
108.1
P10809_1112
75.5
Naive CD8 T-cell nTPM: 100.4
Samples: 6
Max nTPM: 148.3
Min nTPM: 55.7
P10809_1016
77.4
P10809_1031
148.3
P10809_1050
99.0
P10809_1069
136.2
P10809_1087
55.7
P10809_1110
86.0
T-reg nTPM: 118.1
Samples: 6
Max nTPM: 164.6
Min nTPM: 34.6
P10809_1018
85.8
P10809_1037
137.3
P10809_1056
164.6
P10809_1075
149.3
P10809_1094
34.6
P10809_1106
136.9
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
79.3
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 58.2
Samples: 4
Max nTPM: 70.7
Min nTPM: 37.5
RHH5202_R3573
37.5
RHH5230_R3602
70.1
RHH5259_R3631
70.7
RHH5288_R3660
54.4
Effector memory CD8 T-cell nTPM: 61.8
Samples: 4
Max nTPM: 92.7
Min nTPM: 31.3
RHH5203_R3574
50.6
RHH5231_R3603
92.7
RHH5260_R3632
72.6
RHH5289_R3661
31.3
MAIT T-cell nTPM: 61.8
Samples: 4
Max nTPM: 85.1
Min nTPM: 44.1
RHH5233_R3605
44.1
RHH5205_R3576
85.1
RHH5262_R3634
67.2
RHH5297_R3663
50.8
Memory CD4 T-cell TFH nTPM: 50.5
Samples: 4
Max nTPM: 87.4
Min nTPM: 21.7
RHH5300_R3666
47.4
RHH5236_R3608
87.4
RHH5265_R3637
45.5
RHH5208_R3579
21.7
Memory CD4 T-cell Th1 nTPM: 58.3
Samples: 4
Max nTPM: 76.1
Min nTPM: 41.4
RHH5210_R3581
55.9
RHH5302_R3668
41.4
RHH5238_R3610
76.1
RHH5267_R3639
59.8
Memory CD4 T-cell Th1/Th17 nTPM: 65.5
Samples: 4
Max nTPM: 89.3
Min nTPM: 20.8
RHH5303_R3669
20.8
RHH5211_R3582
78.2
RHH5239_R3611
89.3
RHH5268_R3640
73.5
Memory CD4 T-cell Th17 nTPM: 63.2
Samples: 4
Max nTPM: 93.6
Min nTPM: 41.2
RHH5304_R3670
41.2
RHH5212_R3583
93.6
RHH5240_R3612
50.3
RHH5269_R3641
67.8
Memory CD4 T-cell Th2 nTPM: 66.6
Samples: 4
Max nTPM: 82.3
Min nTPM: 49.5
RHH5305_R3671
64.2
RHH5213_R3584
70.3
RHH5241_R3613
49.5
RHH5270_R3642
82.3
Naive CD4 T-cell nTPM: 61.1
Samples: 4
Max nTPM: 72.1
Min nTPM: 49.1
RHH5306_R3672
68.3
RHH5214_R3585
72.1
RHH5242_R3614
49.1
RHH5271_R3643
54.9
Naive CD8 T-cell nTPM: 57.7
Samples: 4
Max nTPM: 95.2
Min nTPM: 26.8
RHH5201_R3572
26.8
RHH5229_R3601
95.2
RHH5258_R3630
50.6
RHH5287_R3659
58.3
Non-Vd2 gdTCR nTPM: 68.9
Samples: 4
Max nTPM: 91.7
Min nTPM: 35.5
RHH5235_R3607
91.7
RHH5264_R3636
60.3
RHH5207_R3578
35.5
RHH5299_R3665
88.0
T-reg nTPM: 75.0
Samples: 4
Max nTPM: 79.8
Min nTPM: 70.7
RHH5301_R3667
75.5
RHH5237_R3609
79.8
RHH5266_R3638
70.7
RHH5209_R3580
73.8
Terminal effector memory CD4 T-cell nTPM: 69.3
Samples: 2
Max nTPM: 82.4
Min nTPM: 56.1
RHH5243_R3615
82.4
RHH5272_R3644
56.1
Terminal effector memory CD8 T-cell nTPM: 73.6
Samples: 4
Max nTPM: 90.9
Min nTPM: 43.6
RHH5232_R3604
73.1
RHH5204_R3575
86.6
RHH5261_R3633
90.9
RHH5296_R3662
43.6
Vd2 gdTCR nTPM: 79.3
Samples: 4
Max nTPM: 88.5
Min nTPM: 71.2
RHH5234_R3606
74.2
RHH5206_R3577
71.2
RHH5263_R3635
88.5
RHH5298_R3664
83.3
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
