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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA:
1217.9
nTPM
Monaco:
483.5
nTPM
Schmiedel:
76.7
TPM
T-CELLS - HPA RNA-seqi
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
1217.9
HPA sample
nTPM
gdT-cell nTPM: 794.6
Samples: 6
Max nTPM: 1131.6
Min nTPM: 581.6
P10809_1007
601.8
P10809_1022
1030.9
P10809_1041
1131.6
P10809_1060
581.6
P10809_1077
740.8
P10809_1098
681.0
MAIT T-cell nTPM: 1019.6
Samples: 6
Max nTPM: 1237.7
Min nTPM: 643.9
P10809_1006
643.9
P10809_1024
1163.3
P10809_1043
1237.7
P10809_1062
1076.7
P10809_1083
1014.7
P10809_1097
981.0
Memory CD4 T-cell nTPM: 998.4
Samples: 6
Max nTPM: 1354.7
Min nTPM: 748.7
P10809_1014
748.7
P10809_1026
1354.7
P10809_1045
1258.4
P10809_1064
890.7
P10809_1086
896.6
P10809_1113
841.4
Memory CD8 T-cell nTPM: 823.2
Samples: 5
Max nTPM: 1107.2
Min nTPM: 636.0
P10809_1012
636.0
P10809_1027
886.4
P10809_1046
1107.2
P10809_1065
803.2
P10809_1111
683.3
Naive CD4 T-cell nTPM: 1217.9
Samples: 6
Max nTPM: 1672.2
Min nTPM: 760.8
P10809_1015
760.8
P10809_1030
1361.6
P10809_1049
1672.2
P10809_1068
1264.1
P10809_1085
1201.7
P10809_1112
1047.0
Naive CD8 T-cell nTPM: 960.6
Samples: 6
Max nTPM: 1146.8
Min nTPM: 734.6
P10809_1016
816.6
P10809_1031
1129.9
P10809_1050
1146.8
P10809_1069
1037.1
P10809_1087
734.6
P10809_1110
898.7
T-reg nTPM: 1019.2
Samples: 6
Max nTPM: 1693.5
Min nTPM: 547.7
P10809_1018
547.7
P10809_1037
948.5
P10809_1056
1693.5
P10809_1075
1014.8
P10809_1094
1161.2
P10809_1106
749.4
T-CELLS - Monaco RNA-seqi
RNA-Seq data generated by Monaco et al is reported as average nTPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM
483.5
Monaco sample
nTPM
Central memory CD8 T-cell nTPM: 307.3
Samples: 4
Max nTPM: 458.8
Min nTPM: 236.5
RHH5202_R3573
236.5
RHH5230_R3602
291.1
RHH5259_R3631
242.9
RHH5288_R3660
458.8
Effector memory CD8 T-cell nTPM: 227.5
Samples: 4
Max nTPM: 294.9
Min nTPM: 154.4
RHH5203_R3574
223.4
RHH5231_R3603
294.9
RHH5260_R3632
237.4
RHH5289_R3661
154.4
MAIT T-cell nTPM: 329.9
Samples: 4
Max nTPM: 507.2
Min nTPM: 202.1
RHH5233_R3605
342.0
RHH5205_R3576
202.1
RHH5262_R3634
268.2
RHH5297_R3663
507.2
Memory CD4 T-cell TFH nTPM: 483.5
Samples: 4
Max nTPM: 762.9
Min nTPM: 366.2
RHH5300_R3666
429.5
RHH5236_R3608
762.9
RHH5265_R3637
366.2
RHH5208_R3579
375.4
Memory CD4 T-cell Th1 nTPM: 415.9
Samples: 4
Max nTPM: 658.6
Min nTPM: 273.0
RHH5210_R3581
414.7
RHH5302_R3668
658.6
RHH5238_R3610
317.4
RHH5267_R3639
273.0
Memory CD4 T-cell Th1/Th17 nTPM: 388.4
Samples: 4
Max nTPM: 593.7
Min nTPM: 209.4
RHH5303_R3669
593.7
RHH5211_R3582
481.8
RHH5239_R3611
209.4
RHH5268_R3640
268.8
Memory CD4 T-cell Th17 nTPM: 301.7
Samples: 4
Max nTPM: 450.2
Min nTPM: 199.9
RHH5304_R3670
306.2
RHH5212_R3583
450.2
RHH5240_R3612
250.3
RHH5269_R3641
199.9
Memory CD4 T-cell Th2 nTPM: 368.8
Samples: 4
Max nTPM: 479.2
Min nTPM: 247.7
RHH5305_R3671
403.3
RHH5213_R3584
344.8
RHH5241_R3613
479.2
RHH5270_R3642
247.7
Naive CD4 T-cell nTPM: 471.7
Samples: 4
Max nTPM: 630.3
Min nTPM: 279.3
RHH5306_R3672
490.5
RHH5214_R3585
630.3
RHH5242_R3614
486.5
RHH5271_R3643
279.3
Naive CD8 T-cell nTPM: 370.8
Samples: 4
Max nTPM: 491.4
Min nTPM: 306.5
RHH5201_R3572
338.2
RHH5229_R3601
306.5
RHH5258_R3630
491.4
RHH5287_R3659
347.0
Non-Vd2 gdTCR nTPM: 268.7
Samples: 4
Max nTPM: 370.3
Min nTPM: 201.6
RHH5235_R3607
210.4
RHH5264_R3636
292.4
RHH5207_R3578
201.6
RHH5299_R3665
370.3
T-reg nTPM: 421.3
Samples: 4
Max nTPM: 547.5
Min nTPM: 231.7
RHH5301_R3667
525.7
RHH5237_R3609
547.5
RHH5266_R3638
231.7
RHH5209_R3580
380.2
Terminal effector memory CD4 T-cell nTPM: 248.9
Samples: 2
Max nTPM: 322.0
Min nTPM: 175.8
RHH5243_R3615
175.8
RHH5272_R3644
322.0
Terminal effector memory CD8 T-cell nTPM: 323.5
Samples: 4
Max nTPM: 426.8
Min nTPM: 172.8
RHH5232_R3604
293.4
RHH5204_R3575
426.8
RHH5261_R3633
172.8
RHH5296_R3662
400.8
Vd2 gdTCR nTPM: 396.6
Samples: 4
Max nTPM: 545.9
Min nTPM: 234.5
RHH5234_R3606
347.5
RHH5206_R3577
458.5
RHH5263_R3635
234.5
RHH5298_R3664
545.9
T-CELLS - Schmiedel RNA-seqi
RNA-Seq data generated by Schmiedel et al is reported as average TPM.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples. Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. TPM values of the individual samples are presented next to the box plot.