HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.0 nTPM
HPA Brain:22.8 nTPM
GTEx:6.0 nTPM
FANTOM5:40.9 Scaled Tags Per Million
Pig:23.1 nTPM
Mouse:95.5 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.8
Sample id Sample description nTPM
Hippocampus
nTPM: 17.3
1898 Male, age 80, left hemisphere 21.2
1855 Male, age 76, left hemisphere 20.2
2621 Female, age 67, right hemisphere 17.0
2148 Female, age 91, left hemisphere 15.8
1911 Female, age 85, right hemisphere 15.3
2529 Female, age 94, left hemisphere 14.4
Dentate gyrus
nTPM: 18.8
1927 Female, age 91, both hemispheres 22.4
2010 Male, age 76, both hemispheres 21.8
2246 Female, age 85, both hemispheres 18.6
2528 Male, age 74, both hemispheres 18.0
2530 Female, age 94, left hemisphere 16.2
2531 Female, age 67, both hemispheres 15.5
Entorhinal gyrus
nTPM: 18.3
1938 Female, age 85, left hemisphere 23.5
1787 Male, age 76, left hemisphere 19.4
2613 Female, age 94, left hemisphere 19.4
2764 Male, age 80, right hemisphere 17.7
2117 Female, age 91, right hemisphere 15.5
2686 Male, age 75, right hemisphere 14.3
Hippocampus, CA1
nTPM: 20.5
2749 Male, age 80, left hemisphere 25.9
1873 Female, age 85, both hemispheres 22.5
2045 Male, age 76, both hemispheres 21.4
2527 Male, age 74, both hemispheres 17.6
2082 Female, age 91, right hemisphere 15.1
Hippocampus, CA2
nTPM: 18.7
1892 Male, age 76, both hemispheres 23.9
1963 Male, age 80, left hemisphere 23.9
1940 Female, age 85, left hemisphere 17.1
2437 Female, age 94, left hemisphere 16.5
2249 Male, age 74, both hemispheres 16.0
2113 Female, age 91, right hemisphere 14.8
Hippocampus, CA3
nTPM: 17.9
2137 Male, age 80, left hemisphere 22.6
1867 Male, age 76, both hemispheres 19.7
1891 Female, age 85, both hemispheres 18.7
2436 Male, age 74, both hemispheres 17.1
2620 Female, age 94, left hemisphere 16.6
2861 Female, age 67, both hemispheres 12.8
Parahippocampal cortex
nTPM: 18.7
1850 Male, age 80, both hemispheres 24.0
1990 Female, age 91, right hemisphere 20.9
1933 Female, age 85, both hemispheres 20.7
2693 Female, age 94, both hemispheres 20.7
2250 Female, age 67, right hemisphere 19.1
2532 Female, age 72, left hemisphere 18.2
2692 Male, age 74, both hemispheres 17.3
2245 Female, age 91, both hemispheres 17.0
2018 Male, age 76, both hemispheres 15.4
2622 Female, age 67, right hemisphere 14.0
Perirhinal gyrus
nTPM: 22.8
1841 Female, age 85, right hemisphere 24.6
1847 Female, age 91, left hemisphere 24.3
1794 Male, age 80, right hemisphere 22.4
2848 Male, age 76, right hemisphere 21.7
2521 Female, age 94, right hemisphere 20.8
Subiculum
nTPM: 16.6
1977 Female, age 85, both hemispheres 20.4
1901 Male, age 80, both hemispheres 17.8
2729 Female, age 91, right hemisphere 16.8
2438 Female, age 94, left hemisphere 15.7
2619 Male, age 74, both hemispheres 14.9
2042 Male, age 76, both hemispheres 14.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.0
Samples: 197

Max nTPM: 11.3
Min nTPM: 3.5
Std nTPM: 1.5
Median nTPM: 5.7
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 11.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 10.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 10.4
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 10.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 9.5
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 9.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 9.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 9.1
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 8.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 8.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 8.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 40.9
FF:10169-103B7 60 years, female 55.0
FF:10153-102I9 76 years, female 26.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.1
Pig sample Sample description nTPM
Subiculum
nTPM: 23.2
Samples: 4

Max nTPM: 28.0
Min nTPM: 20.5
Sample A Female 28.0
Sample B Female 20.5
Sample C Male 22.7
Sample D Male 21.4
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.8
Sample A Female 23.1
Sample B Female 22.0
Sample C Male 23.3
Sample D Male 17.8
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 24.3
Min nTPM: 21.2
Sample A Female 22.1
Sample B Female 24.3
Sample C Male 23.2
Sample D Male 21.2
Ventral hippocampus
nTPM: 19.6
Samples: 4

Max nTPM: 21.5
Min nTPM: 17.5
Sample A Female 21.5
Sample B Female 17.5
Sample C Male 19.4
Sample D Male 20.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.5
Samples: 4

Max nTPM: 112.4
Min nTPM: 87.9
Sample A Male 91.6
Sample B Male 87.9
Sample C Female 89.9
Sample D Female 112.4
Hippocampal formation
nTPM: 88.1
Samples: 4

Max nTPM: 97.3
Min nTPM: 80.2
Sample A Male 86.8
Sample B Male 88.1
Sample C Female 97.3
Sample D Female 80.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
68745504 Antisense, RP_050210_02_A12, Mouse strain C57BL/6J (56 days, male) 2.5

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